Lactiplantibacillus argentoratensis: LPA65_03870
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Entry
LPA65_03870 CDS
T07625
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
larg
Lactiplantibacillus argentoratensis
Pathway
larg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
larg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPA65_03870 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
larg03019
]
LPA65_03870 (recQ)
03400 DNA repair and recombination proteins [BR:
larg03400
]
LPA65_03870 (recQ)
Enzymes [BR:
larg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPA65_03870 (recQ)
Messenger RNA biogenesis [BR:
larg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPA65_03870 (recQ)
DNA repair and recombination proteins [BR:
larg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPA65_03870 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AYJ34967
UniProt:
A0AAN1UHP1
LinkDB
All DBs
Position
832151..833959
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AA seq
602 aa
AA seq
DB search
MIDLAAAQQVLKTTFGYDEFRPGQKAVIEQVLAGENTLAIMPTGGGKSLCYQIPALLFQG
LTVVVSPLISLMKDQVDALNDNGIAATFINSSLDFQEINERLQELRAGDYTLLYVAPERL
DSDYFIQALGRLPIQLLAIDEAHCISQWGHDFRPSYLALSTAIEQLPTHPQVLALTATAT
EQVAADICGRLAIDPQHEVNTGFARNNLDLTVVKDQDTDRYILDYLKVNHGEAGIIYAST
RKEVMRLTSLLRKHDIKATPYHAGLDDAVRRQNQEDFLYDRVDVMVATNAFGMGIDKSNV
RFVIHAQVPGTLEAYYQEAGRAGRDGLPSEAILIFRPVDIQLQHFFIDESEMDTEHRHLA
YQKLQVMTRYANTQGCLQQFILKYFGEKSAPCGRCSNCTDQRESQDITTAAQQVLSCVVR
LHSRFGKGVVAQVLTGANNQRVRESNLNTLSTYGLMSGQRQKSVVELIDFLTASGYLQSV
GGQYPTLTVSASGVAVLKGTTTVHRKTAQKVQQTVPENSELFEQLRTLRRQLAEEQGVPP
FVIFSDRTLHSMCDLMPEDDAAFLTVKGVGASKLEKYGETFMATIRAAAHAEAATDSDNE
TD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgattgacttagcggcggcacagcaagtattgaagaccacgttcggatatgatgagttc
cgaccgggccaaaaagcagtgattgaacaagtgttggccggtgaaaacaccctggcgatt
atgccgaccgggggcggtaagtcgttatgttaccagattccagcgttgctttttcaaggc
ctgactgtcgttgtctccccattgatctctctaatgaaggatcaggtggacgcgttaaat
gataatggtattgcggcgacttttattaatagctcactggactttcaagaaataaacgaa
cggctccaagaactacgggcgggggattataccttactgtacgtggcaccagagcggtta
gattcggattactttattcaagcgctgggccggttgcctatccaactgttagcgatcgat
gaagcccactgtatttcacaatgggggcacgattttcgccccagttacttggcactcagc
acggcgattgagcaattgccgacccatccgcaggtcctagctttgactgcgacggcaact
gagcaagtcgctgcggatatttgcggccgcttagcgattgatccacaacatgaagtgaat
actggttttgcccgcaataacttggatttgacggtggtcaaggatcaggataccgaccgt
tacattttagattatttgaaagttaatcatggtgaagccgggattatttatgccagcacc
cgtaaagaagtgatgcggctgacgagtttgttgcgaaagcatgatattaaggccacgccg
taccacgctgggctagacgatgcggttcggcggcaaaaccaagaggatttcttgtacgac
cgtgttgacgtcatggtggcaaccaacgcgtttggaatgggcattgataagagtaacgtg
cgttttgtgattcacgcgcaagtccccggaactttggaagcttattatcaggaagccggt
cgggctggccgggatgggttacctagtgaagcgattttgatttttcgaccggttgatatt
caacttcagcacttctttattgatgagtcggagatggatacggagcaccgacacctggcg
tatcagaagctacaggtgatgacacggtatgcgaatacccagggctgtttacaacagttt
atcttgaaatactttggtgaaaaatccgcgccgtgtggtcggtgtagtaattgtactgat
cagcgggaatcacaggatatcaccacggcagctcaacaagtcttatcgtgcgtcgttagg
cttcattcccggttcggtaaaggggtcgtggcccaggtattgacgggcgctaataatcag
cgggtgcgcgaatcaaaccttaatacgttgtcgacttacggattgatgtctgggcagcga
cagaagagtgtcgtggaattgatcgactttctaactgcgagcggttatttgcagtcagtg
ggcggtcagtatccaacactgacagtctcagcgagtggggtggctgtgcttaaaggaacg
accacggtacaccggaagacggcccaaaaggtgcaacagacggtaccagagaacagtgag
ctcttcgaacagttgcggacattgcggcgtcaattggcggaagaacagggcgtaccacca
ttcgtgattttttctgaccggacgcttcattcgatgtgtgacctgatgccagaagacgac
gcagctttcttaacagtcaaaggggtcggtgccagcaagctggaaaagtatggtgaaacc
ttcatggcgacgatccgggcggcagcccatgcggaagcagcaactgatagtgacaatgag
actgattag
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