Lactiplantibacillus argentoratensis: LPA65_05900
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Entry
LPA65_05900 CDS
T07625
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
larg
Lactiplantibacillus argentoratensis
Pathway
larg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
larg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPA65_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
larg03400
]
LPA65_05900
Enzymes [BR:
larg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LPA65_05900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LPA65_05900
DNA repair and recombination proteins [BR:
larg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPA65_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AYJ35326
UniProt:
A0AAN1UHV7
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All DBs
Position
1257960..1258784
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AA seq
274 aa
AA seq
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MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL
LFRFSNGLTMVSHLRMEGKYNVVPRGEDQGKHTHVIFHLTDDRDLLYNDTRKFGRMTLVP
TGEEGTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGIGNIYADETL
WMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFSTAFGEAGQFQNHLHV
YGREGEPCERCGTIIEKIKVAQRGTHFCPLEQRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaactgttcgtcgcggcttaaatcgtctggttagtggg
gcaacgattgctagtatcgaggttttttggccgaaaattattaataatgatgtcgatagt
ttcaaacagcgtttagccaaccaaacgatccagaccattgatcggcgggggaagtattta
ttgtttcgctttagcaatggtctgacgatggtgtcgcatttgcggatggaaggcaagtat
aatgttgtaccgcgtggtgaagatcaaggtaaacacacgcacgtgatcttccatctgacc
gatgatcgtgatttgttgtacaacgatacgcgtaagttcgggcgaatgacgctcgtgccg
accggtgaagaaggcacggtggcgggattgcggacaattggcccggaacccgttgctgaa
cagttaacactggcttatatgacggctacttttggcaagtcgaaaaagatgatcaagcca
ctattgttggatcaaagtaagattgcgggcattgggaatatttacgcggacgaaacgcta
tggatgagtaagattcatccaatgcggcctgctaattcgctaactactgatgagattgct
acattgcgccaaaacattattgatgaaatggcgatggcaattaaaggtcacggcaccact
gttcattcattttcaacggcatttggtgaggccggtcagtttcaaaatcacttacacgtc
tatggtcgtgaaggggaaccttgcgaacggtgtggcacaattattgagaaaatcaaagtg
gcacagcgagggacccatttttgcccgttagaacaacggttgtag
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