Lactiplantibacillus argentoratensis: LPA65_09265
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Entry
LPA65_09265 CDS
T07625
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
larg
Lactiplantibacillus argentoratensis
Brite
KEGG Orthology (KO) [BR:
larg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
larg03019
]
LPA65_09265
03009 Ribosome biogenesis [BR:
larg03009
]
LPA65_09265
Enzymes [BR:
larg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPA65_09265
Messenger RNA biogenesis [BR:
larg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPA65_09265
Ribosome biogenesis [BR:
larg03009
]
Prokaryotic type
rRNA helicases
LPA65_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
ApbA
Microtub_bd
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AYJ35938
UniProt:
A0AAN1UIM6
LinkDB
All DBs
Position
complement(1923806..1925149)
Genome browser
AA seq
447 aa
AA seq
DB search
MTASFEDFKLQPFLMQALTDINFRKPTAVQEKLIPVIAAGRSVIGQSATGSGKTHTFLLP
MINQLNADERYVQAVITTPSRELAYQIQTAAKQLIQHSPKAIHIGLYVGGTDKQEQIEKL
NRHQPQLIIGTPGRILDLMRSQALDVHRATQLVVDEADMTLDLGFLNVVDQIAGRMPADL
QMLVFSATMPQKLTPFLRKYMNNPVMEEIPVESVISPTIDNWLISTKSHDKNSIIYRLLT
IGEPYLVLIFANTKERVQELTHYLRQQGLTVAMIHGDIQPRERKRVMRDVQQLKYQFVVA
TDLAARGIDIEGVSHVINDDIPNDLEFFIHRVGRTGRNGMAGTAITLYSPGEEAKVSAVE
AMGIKFKPKAIRDGEIVDSYDRNRRAKRGPKQEKLDPTLIGYVKKSKKKVKPGYKRRIRK
KISDKARMDRRIEQRAAARKERKDRKS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaagttttgaagattttaaattgcagccgttcttgatgcaggcactgactgac
atcaatttccgcaaaccgactgcagtacaagaaaagctaattccagtgattgccgctggc
cgcagtgttattggacagtcagcaactgggagcggtaagacacatacgttcttactgccc
atgatcaaccaactgaatgctgatgaacgatacgtccaggcagttatcacaacgcccagc
cgtgaattagcttatcagattcagactgctgctaaacagttgatccaacacagcccgaaa
gccattcacattggactctatgtcggtggaactgataagcaggaacagattgaaaagcta
aatcggcaccaacctcagttgattatcgggacccctggacggattttagacttaatgcgt
tcccaggcactcgatgtgcatcgtgcgactcagctagtggtcgatgaagctgatatgacg
ttagacttagggtttttgaacgtggttgatcagattgctggccggatgccggctgatttg
cagatgctggtgttctcagccacgatgccacaaaaattaacgccattcttgcgcaagtat
atgaataatccagttatggaagaaattcccgtggaatcagtgatcagtccaacgattgat
aactggctaatttctactaagagtcacgacaagaacagtattatttatcgcttgttgacg
attggtgaaccgtatctcgtgttgatttttgctaacaccaaggaacgtgttcaagagttg
acccattatttgcgccaacaagggttaaccgttgccatgattcatggtgatattcaacca
cgtgaacggaagcgggtcatgcgtgacgttcagcagttgaagtatcaatttgttgttgcc
actgatttagcagcccgggggattgatatcgaaggtgtttcgcacgtcatcaatgatgat
attccaaatgacttggaattcttcattcaccgtgttggccggaccggtcggaatggcatg
gcggggactgcgattacgttatatagcccgggtgaagaagccaaggtcagtgcagttgag
gcaatgggcatcaagttcaagccgaaagcgattcgcgatggtgagattgtggattcgtat
gaccgtaatcggcgggctaaacggggacctaaacaagagaagttggatccaacgttgatt
ggctacgtcaagaagtctaagaagaaggtcaagccgggttacaagcgtcgtattcgtaaa
aagatcagcgataaggcgcggatggaccgtcgcatcgaacagcgagcggctgcccgcaag
gaacgtaaggatcgtaagtcttaa
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