Lactiplantibacillus argentoratensis: LPA65_09335
Help
Entry
LPA65_09335 CDS
T07625
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
larg
Lactiplantibacillus argentoratensis
Pathway
larg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
larg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPA65_09335 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
larg03019
]
LPA65_09335 (rny)
Messenger RNA biogenesis [BR:
larg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LPA65_09335 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF7262
Motif
Other DBs
NCBI-ProteinID:
AYJ35952
UniProt:
A0AAN1Q2G1
LinkDB
All DBs
Position
complement(1943444..1945003)
Genome browser
AA seq
519 aa
AA seq
DB search
MNVFGIILAVIAIVVGYGIGYYVRKNVHEKELDVAKNTAEGIISEAKRAAETHKKEKVLE
AKEESHRYRAEVEAELKQRRNEVQKQEDRLLQREETLDHKENTFEKREDALGKKEDKIAN
EQKRVEQQQQSAASLITQRQAELERVAALSQEQARDQILTQTREQLTHERAVLIKENTDE
VKAQSEKEAKNLIVQAIQQSAADMVSETTVSVVSLPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGYDPIRREIAKIALEKLIQDGRIHPARIEEMVEKARKEMDEKIRE
TGEQAVFDLGLHGMHPDLIKLVGRLNYRTSYGQNVLNHSIEVAKLAGVLAAELGEDVTLA
KRAGLLHDIGKAVDHEVEGSHVEIGVELTTKYKESPVVINTIASHHGDVEAKSIIAVLVA
TSDSISAARPGARSESLENYIHRLEKLEAIANNEDGVKKSYAIQAGREIRVIVKPNEISD
LQATVLAHDVKKQIENELEYPGHIKVTVIREVRAVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttcggtataatcctcgcagtcatcgcaattgttgtcggttatgggattggt
tactatgtacgcaagaacgtccatgaaaaagaattggacgttgccaagaacacagccgaa
ggtattatttctgaggccaaacgggcagcggagactcacaagaaagaaaaagtccttgaa
gctaaggaagagagtcatcgttaccgggctgaagttgaagcggagttaaagcaacgccgg
aatgaagttcaaaaacaagaagaccggttgcttcaacgtgaagaaactttagatcacaaa
gagaatacttttgaaaagcgcgaagatgctttaggcaaaaaagaagataagattgccaat
gagcaaaaacgcgttgaacaacagcaacaaagtgcagcttcactaatcacgcaacgtcaa
gctgagttagaacgggtcgccgccttgtcacaagagcaagcacgcgaccagattttgacc
caaacgcgcgaacaattaacgcatgaacgggccgtgttaattaaagaaaatacggacgaa
gtgaaagcgcagtctgaaaaagaagccaaaaacttaattgtccaagcgattcagcaaagt
gctgccgatatggtttctgaaaccacggtttcggtcgtttctttgccgaatgacgacatg
aaaggccgaattatcggtcgggaaggtcgtaacatccgaacgttggaaacgctgacgggt
attgatttaattattgatgacacgccagaagccgtcgttctaagtggttacgatccgatt
cgtcgtgaaatcgcgaaaatcgcgcttgaaaagctaattcaagacgggcggattcatcca
gctcggattgaagaaatggttgaaaaagcacgtaaggaaatggacgaaaaaatccgtgaa
actggtgaacaagccgtctttgatttaggactgcacgggatgcatcctgacttgatcaag
cttgtcggtcggttgaattatcggaccagttatggtcaaaatgttttgaatcactcaatt
gaagttgcgaagttggcgggcgttttagccgccgaacttggtgaagatgttacactcgcg
aaacgcgcaggattattacacgatattggtaaggccgtcgatcatgaggtcgaaggttcc
cacgttgaaattggcgtggaattaacaacgaagtacaaagagagccccgtcgtgattaac
acgattgcctcccatcatggtgatgtggaagcgaagtcgattatcgcggtgttggttgcg
acgtctgattcgatttcagccgcccggccaggtgctcggagtgagtcgctggagaattat
attcatcggctcgagaagctggaagcgatcgctaataatgaggatggcgtcaagaagagc
tatgcgattcaagctggtcgtgaaattcgagtcatcgttaagccaaacgagatttctgat
ttacaggcaactgttttggcgcacgatgtcaaaaagcagattgaaaatgaacttgaatat
cccggtcatattaaggttacggttattcgggaagttcgagcagtggattacgctaaataa
DBGET
integrated database retrieval system