Leucobacter aridicollis: KI794_05135
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Entry
KI794_05135 CDS
T08768
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lari
Leucobacter aridicollis
Pathway
lari03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lari00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KI794_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lari03021
]
KI794_05135
03400 DNA repair and recombination proteins [BR:
lari03400
]
KI794_05135
Enzymes [BR:
lari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KI794_05135
Transcription machinery [BR:
lari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KI794_05135
DNA repair and recombination proteins [BR:
lari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KI794_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
UTX54103
LinkDB
All DBs
Position
1136969..1137955
Genome browser
AA seq
328 aa
AA seq
DB search
MLIAQRPTLTEDSISEYRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRFEGVA
HEFTTIPGVTEDVTEIILNIKGLVVSSEHDEPITAYLRKTGAGEVTAADISAPAGVEVHN
PELVIATLGDDAQFELELTIERGRGYVSAAQNRNDDAEVGRIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVESKPAISPRDAIASAGSTLVELFGLARELNTAAEGVEIGPAPVE
VVAEGELSIPIEDLDLSVRSYNCLKREGINSVSELVALSEAQLMNIRNFGQKSVFEVRDK
LAEMGLSLKDAVPGFDGANFYSYEDDVN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccactctgaccgaagattcaatctccgagtaccgctcgcgc
ttcaccatcgagcccctcgagcctggcttcggttacacgcttggaaactcgctccgtcgt
accctgctttcctcgatccccggagccgctgtgacaagcgttcgcttcgagggcgtcgct
cacgagttcacgacgatccccggtgtcactgaagacgtcaccgagatcatcctgaacatc
aagggcctcgtggtttcgagcgagcacgacgagccgatcaccgcgtaccttcgcaagacc
ggggcaggcgaggttaccgccgctgacatctcggcgcctgctggcgttgaggtgcacaac
cccgagcttgtcattgcgacacttggcgacgacgcacagttcgagcttgagctcaccatc
gagcgcggccgtggctacgtttctgcagcgcagaaccgtaacgacgacgcagaggtaggc
cgtattccggtcgactcgatctactcgcccgtgctcaaggtgacctaccgtgtcgaggca
actcgtgccggcgagcgcactgacttcgaccgcctggtggtcgacgtcgagtcgaagcca
gctatcagcccccgtgacgcaatcgcgtcagcaggttcgacgcttgtcgagctgttcggg
cttgcacgcgagctgaacactgccgctgagggcgtcgagatcggccccgcgccggttgag
gttgtcgccgagggcgagctctcgattccgatcgaggatctcgacctttcggttcgcagc
tacaactgcctcaagcgtgagggcatcaactccgtgagcgaactcgttgcgctctcggaa
gcccagctcatgaacattcgtaacttcggtcagaagtccgtctttgaggtgcgcgacaag
ctcgccgagatgggtctctcgctcaaggacgcggttcccggttttgacggagccaacttc
tacagctacgaggacgacgttaactaa
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