Leucobacter aridicollis: KI794_06890
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Entry
KI794_06890 CDS
T08768
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lari
Leucobacter aridicollis
Pathway
lari03030
DNA replication
lari03430
Mismatch repair
lari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI794_06890 (dnaE)
03430 Mismatch repair
KI794_06890 (dnaE)
03440 Homologous recombination
KI794_06890 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lari03032
]
KI794_06890 (dnaE)
03400 DNA repair and recombination proteins [BR:
lari03400
]
KI794_06890 (dnaE)
Enzymes [BR:
lari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KI794_06890 (dnaE)
DNA replication proteins [BR:
lari03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KI794_06890 (dnaE)
DNA repair and recombination proteins [BR:
lari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KI794_06890 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
UTX54405
LinkDB
All DBs
Position
1536548..1540099
Genome browser
AA seq
1183 aa
AA seq
DB search
MSDSDGFVHLHVHSEYSMLDGAARVKPLMQAVADQGMPAVAMTDHGNTFGAFDFWSSAKD
AGVKPIIGIEAYLTPGTHRTDRTRVRWGDGGGDDVSGGGAYTHMTMLSETTEGMHNLFRL
SSYSSLEGYYFKPRMDRELLQTYSKGLIATTGCPSGEIHTRLRLGQYNEARQAAAEFQDI
FGKDNFFCEIMDHGLEIERRVQKDLLAIARDLGIPLLATNDLHYVHEKDAEAHSALLCVQ
SGSRLDDPNRFQFSGSGYYLKSAAEMRHIFRELPEACDNTLRIAERCEVEFNTSANYMPR
YPVPDGESEDSWFVKEVEKGLHYRYPSGIPDAVRKQAEYEIGVIIQMGFPGYFLVVADFI
NWAKENGIRVGPGRGSGAGSMVAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEVIKYVTEKYGDERVAQIVTYGTIKSKQALKDASRVLGFPFGMGEKLTKAMPPAVM
AKDIPLSGITDSEHPRYKEAAEFRAVLQEDPDAKRVYETALGLEGLKRQWGVHAAGVIMS
SDPLIDIIPLQKREQDGQIVTQFDYPTCEGLGLIKMDFLGLRNLTIISDALENVRLNRGV
ELDLERLELDDAPSYELLARGDTLGVFQLDGGPMRGLLRLMKPDNFEDISAVLALYRPGP
MGADSHTNYALRKNGLQPITPIHPELEEPLKDVLDTTFGLIIYQEQVMSIAQKVAGFSLG
QADILRRAMGKKKKSELDKQYEGFAAGMHERGFSDAAVKALWDILLPFSDYAFNKAHSAA
YGVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKLAIYLNECRRMGINVLPPAVNESFANF
SAVGDDIRFGLGAIRNVGTNVVEAVREAREKKGNFESFHDYLKKVALPALNKRTIESLIK
AGAFDGLGGTRRALLEIHEGAVEGAVKEKRAEENGDVGFDFDSLFAEAAEATGAGSETVS
LVPERPEWNKKDKLAFEREMLGLYVSDHPLRGLETTLAKEASATVEQVTNPDANFDGETV
VLAGLLTSVQHRTAKSGNLYGMATIEDFTGEIQALFMGKSYQEFGPMLQPDSIVALRGKL
NARDDGMSMHAYGVRGIDASVQDEAGTLALTLTEARATEPLMEELQSTLKRHPGDSEIRL
NLITPHAVRVFELRERVRISSDLFGELKGLLGPRCLMDVEELV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggattctgacggtttcgttcatctccacgtgcacagcgagtactcgatgctcgac
ggtgctgcgcgcgtgaagccactcatgcaggctgtcgcggaccagggaatgcctgctgtc
gcgatgaccgaccacggcaacacgttcggcgcgttcgacttctggagctctgcgaaggat
gccggggtgaagcccatcatcggaatcgaggcttacctcaccccgggcacgcatcgtact
gatcgcacgcgggtgcgctggggtgacggtggcggcgatgacgtctctggtggcggcgcg
tacacccacatgacaatgctctccgagacgactgagggcatgcacaacctgttcaggcta
tcgagctattcgtcgctcgagggatattacttcaagccccgtatggacagggagctcctg
cagacgtactccaaggggcttatcgcgacgactgggtgcccctcgggcgagatccatact
cgtctgcgcctcgggcagtacaacgaggcgcgccaggcggcagccgagttccaagacatc
ttcggcaaagacaacttcttctgcgagatcatggatcacgggcttgagatcgagcgccgg
gtgcagaaggatctgctcgcgatcgctcgcgatctcggcattcccctgctcgcgacgaac
gacctgcactacgtccatgagaaggacgctgaggcgcactcggcgctgctgtgcgtgcag
tcggggtcgcgacttgacgacccgaaccggttccagttcagcggctcaggctactacctg
aagagcgcggccgaaatgcggcacatcttccgcgagctgcccgaggcctgtgacaacacc
ctgcgcatcgctgagcgctgcgaggttgagttcaacacctcggccaactacatgccgcga
tacccggtgcccgacggggagagcgaggacagctggttcgtcaaggaggtcgagaagggc
ctccactaccgctacccgagcggcatcccggatgcggttcgaaagcaagccgagtacgag
atcggcgtcatcattcagatgggcttccccggatacttcctcgtcgtcgccgacttcatc
aactgggcgaaggagaacgggattcgggtgggccccggccgtggctcgggcgctggctca
atggtcgcgtacgcgatgaggatcaccgacctcgacccgctgcagcacggcctcatcttc
gagcgctttctcaacccagatcgcgtctccatgcccgacttcgacgttgacttcgatgat
cgtcgccgcggcgaggtcatcaagtacgtgaccgagaaatacggtgacgagcgcgtcgcg
cagattgtgacctacggaacgatcaagtcgaagcaggcgctgaaggacgcctcgcgcgtg
ctcggtttcccgtttggcatgggcgagaagctcaccaaggcgatgccgccggcagtcatg
gcgaaggatatcccgctttctggcattaccgattcggagcaccctcggtacaaggaggcc
gccgagttccgcgccgtgctgcaggaagaccccgatgccaagcgcgtctacgagaccgcg
cttggtctcgaggggttgaagcggcagtggggcgtgcacgcagctggagtgatcatgtcg
agcgatccgctcatcgacattattccgctgcaaaagcgtgagcaagacggtcagattgtt
acgcagttcgactacccgacgtgtgagggcctcggcctcatcaagatggactttctgggg
cttcgaaatctcacgatcatctccgacgcgcttgagaacgtcaggctgaaccgtggggtc
gagctcgaccttgagcgcctcgagctcgacgacgcgccctcgtacgaactgcttgcgcgc
ggcgacacgctgggcgtcttccagctcgatggcggccccatgcgcggcctgcttcgcctg
atgaagcctgacaacttcgaagacatttcggccgtgctcgcactctaccggcccggcccg
atgggcgccgactcgcacacgaactacgcactcagaaagaacgggctgcagccaatcacc
ccgatccaccctgagctcgaggaaccgttgaaagacgtgcttgacacgacattcggcctc
atcatctaccaggagcaggtgatgtcgatcgcgcagaaggtggcgggcttctccctgggc
caggcagatattctgcggcgggcgatgggcaagaagaagaagtctgagctcgacaagcag
tatgagggcttcgctgccggcatgcacgagcgtggctttagcgacgccgcggtgaaggcg
ttgtgggacatcctgctgccgttctcggattacgcgttcaacaaggctcactctgcagca
tacggtgtggtgagctactggaccgcttacctgaaagcgcactacccggccgagtacatg
gcagcgctgctgacgagcgttggcgattcaaaggacaagctcgcgatctacctcaacgag
tgccgcaggatgggcatcaacgtgcttccgccagctgtgaatgagtcgttcgcgaacttc
tcggccgtcggcgacgacatcaggtttggactgggagcaattcgcaacgtcggcacgaac
gtcgtcgaagccgtccgggaggcgcgcgagaagaagggcaacttcgagtcgttccacgac
tacctcaagaaagtcgcgctgcccgcgctgaacaagcgcacgatcgagtctctcatcaag
gctggcgcgttcgatggactcggcggtacgcgtcgcgcgctcctcgagattcacgagggc
gcggttgaaggcgcggtgaaggagaagcgggccgaggagaacggtgacgtcgggttcgac
tttgacagcctcttcgcggaggccgccgaggccaccggggcgggctcggagacggtgtcg
ctcgttcccgaacggccggagtggaacaagaaggacaaactcgcgttcgagcgtgagatg
cttggcctgtacgtgtctgaccacccgcttcgcggcctcgagacgacgctcgcgaaagag
gcgtcggcgactgtcgagcaggtgacgaatcctgatgcgaactttgatggcgagaccgtc
gtgcttgctgggctcctcacgagcgtgcagcaccgcacagcgaagtcgggaaacctctac
ggcatggcgactatcgaggacttcacgggtgaaatccaggcgctcttcatgggcaagtcg
taccaggagttcgggccgatgctgcagccagactcgattgtcgcgctcaggggcaaactc
aacgcgcgagatgatggaatgtcgatgcacgcgtatggcgtgcgcggaattgacgcgtcg
gtccaagacgaggcagggacgcttgcgctcacgttgacggaggcgcgggcgaccgagccg
ctgatggaagaacttcagtcgacgctgaagcggcatcctggcgattcagagattaggcta
aacctcatcacgccacacgctgtgcgcgtgtttgaactccgagaacgggtgagaatctct
tccgacctgttcggtgagctcaaggggttgctggggccgcgctgtctcatggacgtagag
gagcttgtgtag
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integrated database retrieval system
