Leucobacter aridicollis: KI794_12325
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Entry
KI794_12325 CDS
T08768
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lari
Leucobacter aridicollis
Pathway
lari03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lari00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KI794_12325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lari03021
]
KI794_12325
03400 DNA repair and recombination proteins [BR:
lari03400
]
KI794_12325
Enzymes [BR:
lari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KI794_12325
Transcription machinery [BR:
lari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KI794_12325
DNA repair and recombination proteins [BR:
lari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KI794_12325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UTX52517
LinkDB
All DBs
Position
complement(2738575..2742465)
Genome browser
AA seq
1296 aa
AA seq
DB search
MLEGTSFNELQIRLATADDIRGWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRYKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHEDMAELEAELRLELKALSDQRDIAVAQRQQQAETD
LAALEAEGAKADQRRRAEASAEKDMTLIRRGFDDDIARLERVWDDFRNLKVGDLKPEDAV
FADLMDRYGDYFEAYMGAEAIKKRLEAFDLEAEAETLHLQIAEGKGQKKIRAIKRLKVVS
AFLQTGASPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLMDLSHAQNVKAAKRMVERSR
SEVWDVLEEIIRERPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKPGAVGEGR
AFGSIAEAILAMDEHTLDLGALAKIRLTGYTDASGVTSEKPVLVETTLGRAIFNEALPAD
YVYFEQVADKGTLSTLVNDLAERYPKVEVAATLDRIKDAGFHWATRSGVTVALSDIVTPS
NKAEILAAHETEAAAVQKRFDRGLITEQERHADLVKIWTQATDEVAEAMRDAFPADNTIF
RMVSSGARGNWLQIRNIAGMRGLVSDPKGEIIPRPIINSYREGLSVAEYFIATHGARKGL
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTRRGLDLPIAAEVDGQIVRDENVENSVY
ARTLAADAVNAAGDIVAAAGSDVGDVAIDMLVGAGVTEIKVRSVLTCESAVGVCATCYGR
SLATGQRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEART
PKGASPIAEAAGRITIEDTEKSRRLILTPDDGTEEKQYPVLKRSTLIVEDGQHVELGQPF
IQGTLDPKDILQVGSTEGGKHIPGERAVQKYLVEGVQGVYRSQGVPIHDKHIEVIVRQML
RKVTVVDHGETELLPGELVDRSRYQRINREALVDGKRAATARPEVMGITKASLATESWLS
AASFQETTRVLTQAAMEGSKDPLVGLKENVIIGKLIPAGTGLSTYTDVEVSATEEARAER
YPNRMYAGEGTFDENDFSFVDFDTFTSDEFNPGNYS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgagggtacgagtttcaatgagctgcagattcgtctggcgaccgccgacgatatc
cgtggctggtcgttcggcgaggtcaagaagccggagacaatcaactaccgcacgctgaag
cctgagaaggatggtctgttcggcgagcagatcttcggtcctagccgcgactgggagtgc
gcgtgtggcaagtacaagcgtgtgcgttacaagggcatcgtttgtgagcgttgtggcgta
gaggtcaccaagtcgagcgttcgtcgtgagcgcatgggccacatcgagctcgcagctccc
gtgacccacatctggtacttcaagggcgtgccgtcacgcctcggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatgatcatcgacatcgat
gaagagggccgccacgaagacatggcagagcttgaggccgagctgcggctcgagctgaag
gcgctgtccgatcagcgtgacatcgctgttgctcagcgtcagcagcaggctgagaccgat
ctcgcagcccttgaggctgagggcgccaaggctgaccagcgccgccgcgcagaggcctcg
gctgagaaggacatgaccctgatccgccgcggcttcgacgacgacatcgctcgtctcgag
cgcgtctgggacgacttccgcaacctcaaggttggcgacctcaagcccgaggacgctgtc
ttcgcagacctcatggaccgctacggtgattacttcgaggcctacatgggcgccgaggcg
atcaagaagcgccttgaggccttcgaccttgaggcagaggctgagacgctgcacctccag
atcgccgagggcaagggccagaagaagatccgtgcgatcaagcgcctgaaggtcgtcagc
gcattcctgcagaccggtgcaagcccggccgctatggtgctcgacgtcgttcccgtgatc
ccgcccgagctgcgcccgatggtgcagctcgacggtggccgcttcgcgacctcggatctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctgcgccgcctgctcgatctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaagctgtcgacgcg
ctgttcgacaacggccgccgcggccgccccgtgacgggcaccggcaaccgtgcgctcaag
tcgctctctgacatgctcaagggcaagcagggtcgtttccgtcagaacctgctgggtaag
cgtgttgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgtggtctgccgaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctg
atggacctctcgcacgcacagaacgtgaaggccgcgaagcgcatggtcgagcgttcgcgc
tcagaggtctgggacgtactcgaggagatcatccgcgagcgcccagtcatgctgaaccgt
gcacctaccctgcaccgcctcggcatccaggcgttcgagccgcagctcgttgagggcaag
gctatccagctgcacccgctcgtatgtgcagcgttcaacgctgacttcgacggcgaccag
atggcagttcacctgccgctgtcggttgaggcgcaggctgaggcacgcgtgctcatgctc
gcatcgaacaacatcctgaagccgtctgacggccgcccggtcaccctgccctcgcaggat
atgatcatcggtctgcaccacctcaccacggtgaagcctggtgctgtcggcgaaggccgt
gcgttcggctcgatcgcagaggcgatcctcgcgatggacgagcacacgctcgacctcggc
gcactcgcgaagatccgcctcaccggatacaccgacgcttcgggtgtgacctcggagaag
cccgtgctcgtcgagaccactctcggccgcgcgatcttcaacgaggcgctgcccgctgac
tacgtgtacttcgagcaggttgccgacaagggcacgctgtcgacgctggtcaacgacctc
gccgagcgctacccgaaggtggaggtcgctgcgaccctcgaccgcatcaaggatgccggt
ttccactgggcaacccgttcgggcgtgaccgttgcgctgtctgacatcgtgaccccgtcg
aacaaggccgagatccttgccgcccacgagaccgaggcagccgcagtgcagaagcgcttc
gaccgcggtctcatcaccgagcaggagcgtcacgcagatctcgtgaagatctggacccag
gcaaccgacgaggtcgccgaggccatgcgcgacgcattccccgcagacaacaccatcttc
cgcatggtgtcgtcgggtgctcgtggtaactggctgcagatccgtaacatcgccggtatg
cgtggcctcgtgtccgacccgaagggcgagattatcccgcgcccgatcattaactcgtac
cgcgagggcctgtcggtggcggagtacttcatcgcgacccacggtgcacgtaagggtctt
gccgataccgcgcttcgtaccgccgactcgggttacctgacgcgtcgtctggtcgacgtc
tcgcaggatgtcatcatccgcgaggaagactgcggcacgcgccgcggcctcgacctgccg
atcgcggctgaggttgacggccagatcgttcgcgacgagaacgtcgagaactcggtctac
gctcgtaccctcgctgctgacgcggtgaacgctgcaggtgacattgtcgctgctgcgggc
tccgacgtgggcgacgttgcgatcgacatgctcgtcggcgctggcgtgactgagatcaag
gtgcgctccgtgctcacctgtgagtctgcggttggcgtctgcgcgacctgctacggccgt
tcgctcgcgaccggccagcgcgttgacatcggcgaggccgtcggcatcatcgcggcacag
tcgattggtgagccgggtacccagctgaccatgcgtaccttccacaccggtggttcggct
tcggctgacgacatcacgcagggtcttccccgcgtgcaggagctcttcgaggctcgtacc
ccgaagggtgcgtcgccgatcgctgaggccgcaggccgcatcacgatcgaagacaccgag
aagagccgccgcctgatcctcacacctgacgatggcaccgaggagaagcagtaccccgta
ctgaagcgttcgacgctcatcgtcgaggacggtcagcacgttgagctcggccagccgttc
atccagggaacgctcgacccgaaggacatccttcaggtcggctcgaccgagggcggcaag
cacatcccaggtgagcgcgcagtgcagaagtacctcgttgagggcgtgcagggcgtctac
cgttcgcagggcgtgccgatccacgataagcacatcgaggtcatcgttcgccagatgctc
cgcaaggtcaccgttgtcgaccacggcgagacagagctgcttccgggtgagctcgtcgac
cggtcgcgctaccagcgcatcaaccgcgaggcactcgttgacggcaagcgtgcggcgacc
gcgcgtcccgaggtcatgggtatcaccaaggcatcgctcgcgaccgagtcgtggctctcg
gcggcctccttccaggagaccacccgcgtgctcacgcaggctgcgatggagggatcgaag
gatccgctcgtcggcctcaaggagaacgtcatcatcggtaagctcatcccggctggtacg
ggcctgagcacctacaccgacgtcgaggtttcggctacggaagaggctcgcgccgagcgt
tacccgaaccgcatgtacgcgggcgagggcacgtttgacgagaacgacttctcgttcgtt
gatttcgacaccttcacctctgacgagttcaaccccggcaactacagctag
DBGET
integrated database retrieval system
