Leucobacter aridicollis: KI794_12330
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Entry
KI794_12330 CDS
T08768
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lari
Leucobacter aridicollis
Pathway
lari03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lari00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KI794_12330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lari03021
]
KI794_12330
03400 DNA repair and recombination proteins [BR:
lari03400
]
KI794_12330
Enzymes [BR:
lari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KI794_12330
Transcription machinery [BR:
lari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KI794_12330
DNA repair and recombination proteins [BR:
lari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KI794_12330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UTX52518
LinkDB
All DBs
Position
complement(2742539..2746054)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAAARNASSTNNPKNGRNHSRLSFAKISDTLSVPNLLALQLESFDWLVGNDAWSARVEEA
QAQGRDDIALKSGLEEIFEEMSPIEDNAGTMQLSFENPILDEQKFSIDECKERGKTYSAP
LYVEAAFYNTETQVLKSQTVYMGDFPLMTDKGTFIINGTERVIVSQLVRSPGVYFERQQE
KTSDKDVFSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGMTTGEILEEF
AGYESIALTLEKDGIVEKEGVSLQEEALKDIYRKQRPGEQVAIEAARALLDNSYFNPKRY
DLAKVGRYKINRKLGLEAPITDSVLSLEDIVATIKYLVGLHAGTETLPGTRDGKAFDNRL
DTDDIDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPNTLINTRPVLA
AIKEFFGTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCP
IETPEGPNIGLIGALATFARINAFGFIETPYRRIVDGTVTDQVDYLTAHEEDEFLIAQAG
APVDKDGKFAEKQVLARPRGSEVQLVDADQVQYMDVSARQMVSVATSLIPFLEHDDANRA
LMGANMQRQAVPLVRSESPLVGTGMEGYAAIDAGDVIVAEQAGVIQDVSADVVTVMLDEG
GTKKYYMRKFDRSNQGTNYNHRVIVKAGERIEAGEVIADGPATENGELALGKNLLVAFMP
WEGHNFEDAIILSQNLVKDDTLSSIHIEEYDVDARDTKLGKEEITRDLPNASMEALKDLD
ERGIIRIGAEVNPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGVAG
TVTSVKVFDAENDNDDDLGSGVNQRVVVYIAQKRKITEGDKLAGRHGNKGVISKILPVED
MPFLEDGTPVDVILNPLGIPGRMNFGQVLEIHLGWIAKQGWKVDGSPEWAAKLAESALQA
EPNTKVATPVFDGASELEIAGLLDSTTPNRDGERLIDSSGKTRLFDGRSGEPYPYPISVG
YMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQ
ELLTVKSDDILGRVKVYEAIVRGENIPEPGVPESFRVLMKEMQSLCLNVEVLGADGNAVS
LRDNDDEAHRTAEELGINLSTRFEAASADEI
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcgcaacgcatcgtccaccaataatccgaagaacggtcgcaaccactcg
cgactctcattcgccaagatttccgacacgctgtcggtgccgaacctgctggcactacag
ctcgagagcttcgactggctcgtcggcaacgacgcgtggtctgcacgcgtcgaagaggca
caggctcaggggcgcgatgacatcgcgctgaagagcggcctcgaggagatcttcgaggag
atgtccccgatcgaggacaacgctggcaccatgcagctctcgttcgagaacccgatcctc
gacgagcagaagttctcgatcgacgagtgcaaggagcgtggcaagacctactcggctccc
ctctacgttgaggcggcgttctacaacactgagacccaggtgctgaagagccagactgtc
tacatgggcgacttcccgctcatgacagacaagggcaccttcatcatcaacggcaccgag
cgcgtcatcgtgtcgcagctcgtccgttcgcccggcgtctacttcgaacgtcagcaggag
aagacctccgataaggacgtgttctcggcacgcgtcatcccgagccgcggtgcatggctc
gagttcgagatcgacaagcgtgaccaggtcggcgtccgtatcgaccgcaagcgcaagcag
tctgtcaccgtgttcctgaaggcgctcggcatgacaaccggcgagatcctcgaggagttc
gcaggatacgagtcgatcgccctcaccctcgagaaggacggcatcgtcgagaaggaaggc
gtcagccttcaagaggaagccctcaaggacatctaccgcaagcagcgcccgggcgagcag
gttgcgatcgaggctgcgcgcgcgctcctcgacaacagctacttcaacccgaagcgctac
gacctcgcgaaggtcggccgctacaagatcaaccgcaagctcggcctcgaggctccgatc
accgactcggtgctctcgctcgaagacatcgttgcgacgatcaagtacctcgtcggcctg
cacgcaggaaccgagacactccccggcacccgcgacggcaaggcattcgacaaccgcctg
gacaccgacgacattgaccacttcggcaaccgtcgtatccgcgccgttggcgagctgatc
cagaaccaggtccgcacgggcctcagccgcatggagcgcgtcgtccgcgagcgcatgacc
acgcaggacatcgaagcgatcacgccgaacacgctgatcaacacgcgtcccgtgctcgca
gcgatcaaggagttcttcggaacctcgcagctgtcgcagttcatggaccagaacaacccg
ctcgcgggcctcaccaacaagcgtcgtctgtcggcgctcggccccggtggtctctcccgt
gaccgcgcaggcgtcgaggtgcgagacgttcacccgtcgcactacggccgcatgtgcccg
attgagacccctgaaggcccgaacattggtctgattggtgcgctcgcaacgttcgcacgc
atcaacgcctttggcttcatcgagaccccgtaccgtcgcatcgtcgacggcaccgtcacc
gaccaggtcgactacctcaccgcccacgaagaggacgagttcctcatcgcgcaggccggt
gctcccgtcgacaaggacggcaagttcgccgagaagcaggtcctcgctcgcccccgtggc
tccgaggtgcagctcgtcgacgcagaccaggttcagtacatggacgtctcggcccgccag
atggtgtcggttgcgacttcgctgattccgttcctcgagcacgacgatgcgaaccgcgcg
ctcatgggtgcgaacatgcagcgtcaggctgttccgctcgttcgctccgagtcgccgctt
gtcggcaccggtatggagggctacgcagccatcgacgccggcgacgttatcgtcgctgag
caggctggcgtgatccaggacgtgtcggctgacgtcgtcacagtgatgctcgatgagggc
ggcacgaagaagtactacatgcgcaagttcgaccgctcgaaccagggcacgaactacaac
caccgcgtcatcgtcaaggctggcgagcggatcgaggccggcgaggttatcgccgacggc
cccgcaaccgagaacggtgagctcgcgctcggcaagaacctcctcgtagcgttcatgccg
tgggagggtcacaacttcgaggacgcgatcatcctcagccagaacctcgtgaaggacgac
acgctgtcgtccatccacatcgaggagtacgacgtcgacgcgcgcgacaccaagctcggt
aaggaagagatcactcgcgatctccccaacgcgagcatggaagcgctgaaggatctcgac
gagcgcggcatcatccggatcggcgcagaggtcaacccgggcgacatcctcgtcggtaag
gttaccccgaagggcgagaccgagctctcggccgaggagcgcctgctccgtgcaatcttc
aacgagaagagccgcgaggttcgcgacacctcgctgaaggtgccgcacggcgttgcaggc
accgtcacctccgtgaaggtgttcgacgctgagaacgacaacgacgatgacctcgggtcg
ggcgtcaaccagcgcgtagtggtctacattgcgcagaagcgtaagatcaccgagggcgac
aagcttgctggccgtcacggcaacaagggcgtcatctcgaagatcctgcctgtcgaggac
atgccgttcctcgaagacggaacgcctgtcgacgtgatcctcaacccgctcggtatcccg
ggccgaatgaacttcggtcaggtcctcgagatccacctcggctggatcgcgaagcagggc
tggaaggtcgacggttcgcctgagtgggctgcgaagcttgctgagtcggcgctccaggct
gagccgaacacgaaggttgcgacccccgtgttcgacggcgcctcggagctcgaaatcgcg
ggtctcctcgactcgacgactccgaaccgtgacggtgagcgcctcatcgactcgagcgga
aagacccgtctgtttgacggtcgctcgggcgagccgtacccgtacccgatctcggtcggc
tacatgtacatcctgaagctgcaccacctcgtcgacgacaagatccacgcgcgttcgact
ggcccgtactcgatgatcacccagcagcccctcggtggtaaggcgcagttcggtggacag
cgcttcggtgagatggaagtgtgggccctcgaggcctacggtgccgcgtacgcgctccag
gagctgctcacggtcaagtccgacgacatcctcggccgcgtgaaggtctacgaggccatc
gtccgtggcgagaacattccggagccgggcgtgcccgagtcgttccgagtgctcatgaag
gaaatgcagtcgctctgcctgaacgttgaggtgctcggagccgacggcaacgccgtcagt
ctgcgcgacaacgacgacgaggcgcaccgcacagcggaagagctcggtattaacctgtcc
actcgcttcgaggcagcttcggctgacgagatctaa
DBGET
integrated database retrieval system
