Leucobacter aridicollis: KI794_12405
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Entry
KI794_12405 CDS
T08768
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lari
Leucobacter aridicollis
Pathway
lari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI794_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lari03000
]
KI794_12405
03400 DNA repair and recombination proteins [BR:
lari03400
]
KI794_12405
Enzymes [BR:
lari01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KI794_12405
Transcription factors [BR:
lari03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KI794_12405
DNA repair and recombination proteins [BR:
lari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI794_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
AlkA_N
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UTX52533
LinkDB
All DBs
Position
2758821..2760461
Genome browser
AA seq
546 aa
AA seq
DB search
MSTQLAALPLSFDACYRAASGRDRRWDGRFYLGVTSTGIYCRPSCPARKPKPENCRFFPS
AAACVAAGFRACKRCRPDALPGSRDWDHRSDLVARAVRGIRDGAVDAGGVSGLAQSLAVS
ERHLRRMLLDEIGATPLQLARTRRAHAARILIEQTDLSLTDVAFAAGFGSVRQFGDTMRE
EFGMPPSAITRRTGQSAPGQGIAKPDGAASPGQHSPPGPESKECPRVTLRLQTRAPFDGR
ATRSFLAAHAIPGRDFIGTDTGTGAPAQTSHAIDVPGGTAHATISWSDVPEVANQRPGML
GIPVVLALPSLADTMPAIQIVRRMLDLDADPAQLAEAFSADPVLGPLVAARPGLRLPGAR
DPHEFALATVLGQQVSLAAARTLQGRLVAEYAEPNRRAERGFSGRVDVSRIAGESPEALQ
STLRITHARAATLQGLALALEEGLDITPGADRERARAELIALRGIGPWTVELIAMRALGD
PDAYPSGDLILRRALGVAGAKEAERAADAWRPFRGYATQFLWADFLASATPGATAPAPPH
SQKEEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactcaactcgcagctctgccccttagcttcgacgcctgctatcgcgccgcgtca
ggccgcgatcggcgctgggacggcaggttctaccttggagtgacgagcacaggtatctac
tgccgtccgtcgtgccccgcacgcaaacccaagccagagaactgcagattctttccgagt
gccgctgcctgcgttgctgccgggtttcgcgcgtgcaagcgatgccgccctgacgctctc
ccaggcagtcgagactgggatcaccgaagtgacctcgtcgcacgtgcggtgcgcggtatc
cgagacggcgccgtcgacgctggcggcgtctcaggcctcgcgcagtcgctggcggtgagc
gagcgccacctccgccgtatgctgcttgacgagatcggagcaacccccctccagctcgcg
cggactcggcgtgcacacgccgcacggatcctcatcgaacagacagacctgtcactcacc
gacgtcgcgttcgcggccgggttcggaagcgtgcggcagttcggcgatacgatgcgcgag
gagttcggcatgccgccctcggcgatcacccgccgcaccgggcagagtgcccccgggcag
ggcatcgcgaaaccagacggcgctgcttcccctgggcagcactcacctccgggtcccgag
tcgaaggagtgtccaagggtgacgctcaggctccagacgcgagcaccattcgatggacgc
gcgactcggtcgttcctcgccgcgcacgcgatcccaggcagggatttcattgggactgac
acaggcacaggggcgcccgcgcagacctcgcacgcgatcgacgtgcctggcggcacggcc
cacgcgacaatctcgtggtccgacgttcccgaggtcgccaaccaacgaccaggcatgctc
ggcatcccagtcgtgctcgccctcccgagcctcgcagacactatgcctgcgatccagatc
gtcaggcgcatgctcgacctcgacgcagacccggcgcagctcgcggaggcgttctccgcc
gaccccgtcctcggtccactcgtcgcagcccgcccggggctccgcctgccaggcgcacgc
gacccacacgagttcgcgctcgcgactgtgctcgggcagcaggtttcgcttgcagctgcc
cgcacactgcagggccgcctggtcgccgagtacgccgagccgaacagacgcgccgaacgg
ggcttttcgggccgtgtcgacgtatctcggatcgccggtgaatcccccgaggcgctgcaa
tcgacgctccgaatcacacatgcccgcgctgcgacgctgcagggcctcgctctcgcgctc
gaggaaggcctcgacatcacccccggcgcagaccgcgagcgggcacgagccgaactcatc
gcgctgcggggcatcggaccgtggaccgtcgagctgatcgcgatgcgcgccctcggtgac
cctgacgcgtacccgtcgggcgacctgatcttacgccgggcactcggcgtcgccggggcg
aaggaggccgagcgtgccgctgacgcgtggcgcccgttccgcggatacgccacccagttt
ctgtgggcggatttcctcgccagcgcaacaccaggcgcaactgcacccgcacccccacac
tctcagaaggaagagcaatga
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