Candidatus Liberibacter asiaticus psy62: CLIBASIA_00955
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Entry
CLIBASIA_00955 CDS
T00948
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
las
Candidatus Liberibacter asiaticus psy62
Brite
KEGG Orthology (KO) [BR:
las00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
las03032
]
CLIBASIA_00955
03400 DNA repair and recombination proteins [BR:
las03400
]
CLIBASIA_00955
Enzymes [BR:
las01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLIBASIA_00955
DNA replication proteins [BR:
las03032
]
Prokaryotic type
DNA Topoisomerases
CLIBASIA_00955
DNA repair and recombination proteins [BR:
las03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLIBASIA_00955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
IL6
Motif
Other DBs
NCBI-ProteinID:
ACT56779
UniProt:
C6XHN6
LinkDB
All DBs
Position
194907..197420
Genome browser
AA seq
837 aa
AA seq
DB search
MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQK
HLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVV
LNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNR
ENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA
TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGL
ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF
LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC
FDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLIKKM
EEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFTADL
EEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKENNE
DSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIPEMKESVLLGNDLE
TKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVDYDKAMSLLSLPREIGIHPETQ
KNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCITEKKKIEKSSRKNSKNQGH
VIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDTVDLEKALKILNIKKQKKL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttataattgtagaatcaccagccaaagcaaaaacgatcagcaaatatttagga
tcgaattataaagtattatcatcttttggacatatacgtgatttgcctgccaaaaaaggg
tcggtgctccccgaaaaagaatttgagatgatttggaatattgatccttcatctcaaaaa
catctgcaaaatattattcacgctgtcaaatcgtctacaattctcattcttgctaccgat
cctgacagagaaggagaagccatatcttggcatgtcttagatgttctacggcagaaaaat
ctcatagaaaaaacaaaaattcaacgcgtatccttcaatgctataaccaaacaagttgta
ctgaatgccatgaaaagtccacgagatatcaatttagatctcgtgaatgcttatctagct
cgacgtgcattagattatctagtaggctttaatctttcaccaattttatggcaaaaactt
ccaggcgctcgttcagcaggcagagtgcaatctgtagctttgcgtctcatatgtaatcgc
gaaaatcaaatagaaagttttgtttcggaagaatactggtcactttcagtcttattagaa
acacctcgcaacgataaatttacagcacatctcacggattttaatggtcagcgtatcgaa
aaaaaatctatcagtaataaaaaagaagcggatgacctcatatcttttgtgaaaaaagct
acttattcggtcgaaaaaatcgaaaataaacccattaaacgtaatccttggcctgctttt
actacctctactctacaacaagttgcttcatctagattaggtttttccgcctcacatact
atgcggatagcacaaaaattatatgaaggaatcgatgttaacggtgaaattgttgggtta
attacctatatgagaaccgatggtgtgcatatgtcacctgatgcacttgaagcagtacgt
cgttccatcacttcccattatggagatcattatcttcctgaaaaaccaagaatatactct
tctaaatccaaaaatgcccaagaggcacatgaggctatacgccccaatgactttgatttt
ctaccttcgaaaatgaaacaatttctggattccgatcaattccaactttataatttgata
tggaaacgcagtgttgctagccagatggcttctgctaaatttgaacgtacaactgtgaat
attattgctacatataacgatcaaatagggcatttacgaaccactggatctctcttatgt
tttgacggatttttaaaagtatgggaaaatcaatatgatcaagagaaaaattccgaagaa
gatatacttcttccatacatcagcgctaacgaacaacttattgctacagaaaccaatgca
tctcaacactttactgaaccacctccgcgatactcagaatcttctttaattaaaaaaatg
gaagagatcggaattgggagaccttctacctatgccacaattttagaaacactctacaaa
agaaaatatgttattgccgaaaaacgtaagattctcccacaaaacacgggtagaatcgtt
acggcatttttagagaatttctttagccaatatgtagaatatgattttacagcagatctt
gaagaaaaactggatgaaatatccactggcaaactaaattggaaagaagttctacatgaa
ttttgggaagaatttattgagaagattgacagtataaaaaaactacgcatatcaaatgta
cttgatattttaaatgataccttatcatctgtaatatttcctcctaaagaaaacaatgaa
gatagtcgtacatgtcctgaatgtcatacccattctctatctttaaaactcagcagtaaa
tatggggcatttgttggatgtactaattatcccgagtgtaagtatacccgtcaattgaca
tcaaacccacaagatataccagaaatgaaagaatctgtgcttcttggaaatgacctagaa
acaaaagaatctgtgacattgcgatcagggcgttttggtttgtatgtgcaacgaggagat
ggaaaagatgctaaacgttgcagtctccctaaaacttggaaaagcgacagtgtagactac
gacaaagcaatgtctttactttctttacctagggaaataggaatacatcctgaaactcaa
aaaaatatcattgctggcactggaaaatatggctactatctgaaccatgatggcgcctat
actaaattagaatcaatagaacaagtcctcacaatcgatcttgagcaagcaatttcttgc
attacggaaaagaaaaagattgagaaatcctctcgaaagaactctaaaaaccaaggtcat
gtgataggcacgcatccagaaggtggatctatcactgttcataacgggcgttatggacct
tatcttcattggaaaaaaatcaatgcaagcctttcaaaagaagaaagtcctgacacagtt
gacctcgaaaaagccttaaaaattctcaatataaaaaaacaaaaaaagctttaa
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