Candidatus Liberibacter asiaticus psy62: CLIBASIA_03580
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Entry
CLIBASIA_03580 CDS
T00948
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
las
Candidatus Liberibacter asiaticus psy62
Brite
KEGG Orthology (KO) [BR:
las00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
las03400
]
CLIBASIA_03580
Enzymes [BR:
las01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLIBASIA_03580
DNA repair and recombination proteins [BR:
las03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLIBASIA_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACT57296
UniProt:
C6XFZ3
LinkDB
All DBs
Position
426908..430030
Genome browser
AA seq
1040 aa
AA seq
DB search
MHNKKPNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQEL
RSEFIEITGKKSTILPIIKSLGDVVEEKFTADLLLSYNLNPPVSNIQRLLELARLILIWR
NKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEEKKWEDLHALKNEKYGMW
WLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHLMKGTKGPIIIAGSTGSIP
ATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLL
DFLDIKREDVKRLGNVSNEMYGRSMVISKSFLPPDTSDMRNTDILENKIPNIQKCFSDVA
LIEADNEREEAISIAIALRMSLDENKKKSALITADRNLARRVKLELTRFGINIDISAGIP
LSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVALRGNK
NSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTN
KNSTCGNLSISDWTKLTVTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGSCIKA
NAIEWIDIITRLIDGETVKPKIEKSSTLFILGTLESRLLNFDTLILGGLNEGVWPKNTAK
NPFLSRVMQSDLNLKTAEKYIGQAAHDFEMANGTRHLIYTRSLRENNIPTIASRWLQRLL
VLGGTDFFDNLKKRGQCYLDWTRKLDYTTKQPHYKRPKPFPPLEAQPRTYSFSEIKQLIN
DPYAVYARRILKLDFIPHFKKDPDRTDRGTLFHNIITELIKKRINKNTPEINHLMKQIID
SHFEKENLPPHIDIIWRHLFHKISHSFLEHEEKIQSSIEKIFVNIPAKMAIESIGIHLTG
FADRIDLLKSGFVDITDYKTGDNPKKETAQKLIDPQLSLEAAALKAGSFSQIDCRKVANL
FYIRLKQKFKIDCITNDKKKYSADELSEKSLKNLIEIVTLLQNGEQPFISHLRLSEKSNI
QSEYDHLARVAEWREEYDIS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcacaataagaaaccgaatgtttttactattgcaccttcttctcctttttttagagag
atgatccccgctctcttaaatgggacactagtagaaaattttcgatatgatccacttaac
cctctattgttagcttcagtgacaatttatgtgccaacaaaacgtgcaatccaagaactg
cgttcagaatttattgaaattacagggaaaaaatctacaattctacctatcatcaaatca
cttggagatgttgtagaagaaaaatttacagcagatcttcttctatcatataatctaaat
cctcctgtctctaatatacaacgcttgttagaactagcacgcttaattctcatttggcgc
aataagttgcctgacataatcaaagatctttatcctgaatcaccattaagcctaccaata
agtcctgctaatgctatttggctagcaaaaaatttagcagatattattgatataatcgaa
acagaagaaaaaaaatgggaagacttgcatgcgcttaaaaacgagaaatatggaatgtgg
tggttacttgctgcagattttttaaaaattgctagcaaatattggacagaacggcttgta
gagcttaatgcttcttctcctgtcggctatcaaatagctctcatgcgtgctgaggcagag
catcttatgaaagggacaaaaggtcctataattattgcaggatcaactggttctatacca
gcaaccgctagattaatgtcgactgtagcaaatcatcccaatggcgcaatagttttacca
gggctagattgccatatacccactgctatatggaatactattacggaaaaatctaccaat
atcacaagttcaaatacgacatactcaacacatccacaatattctttagcaaagcttttg
gactttttggatattaaacgtgaagacgtcaaacgtttaggaaatgttagtaacgagatg
tatggacgttcaatggttatttccaaatcattcttacctcctgatacttccgatatgcgt
aatacagatattttagaaaataaaataccaaatattcaaaaatgtttttctgatgtagca
ttaattgaagcagataatgaacgagaagaagcaatttctatagccatagcactgcgaatg
tctcttgatgaaaataaaaaaaaatctgctttaataaccgccgatcgaaacctcgcccgt
cgtgtaaaattagaacttacacgctttggtataaatattgatatttctgctgggattcca
ctgtcaactacattacacagctccattcttacatcgcttttaaatgcaatctttaaactc
aatgatttcatggctattgctactttagttaaacatcctctggcaaaatttggatttcct
gaaaaatatttatcaagagcaaaaaacgcacttgaattggttgcacttcgaggaaataaa
aattcctatgatatcatggacttaaaatctctagttcttgatagaattgctacccaaaaa
aacaacacacacgtccctcattggcaatcacgtctttctgaagaagataaagaactagct
gttttactcgtggaccacatcctacagtgtataacacctttggttacatataaaacaaat
aaaaactctacttgcggtaacttgagcatatccgactggacaaaattaacagtgacttgc
ttgcaaaatgtgtgtcttgatgaacacaggaaactaccaaatttgtggttcgaagaagaa
ggaaaaactttatcttcgttgttcagcaaaattattgaaactggttcttgtataaaagca
aacgctattgagtggattgatatcattaccagacttattgatggagaaaccgtcaagcct
aaaatagaaaaatcatctactctcttcatacttggtacgttggaatctaggttgttgaat
tttgatacactcatactaggagggctcaatgaaggggtttggccaaaaaacaccgctaaa
aaccccttcttatcacgcgtgatgcaatctgacttaaacttaaaaacagctgaaaaatac
ataggtcaagccgcacatgattttgaaatggctaatggaacacgtcatctcatatataca
cgctctttacgggaaaataatattccgactattgcatcccgttggttgcaacgacttttg
gttttgggaggaaccgatttttttgacaacctaaaaaaaagaggtcaatgctatctagat
tggactaggaagttagattacacaacaaaacaaccacattataaacgtccaaaacctttt
ccacccttagaagcacaacctagaacttattctttttcagaaatcaaacaacttataaat
gatccatatgctgtctatgcaaggagaatcctaaaattggattttattccacactttaaa
aaagatcctgatcgcacagatcgtggaacgctttttcataacattattacagagctcatc
aaaaaaagaattaataaaaatacacctgaaattaatcatctgatgaaacagatcattgac
tctcattttgaaaaagaaaatttacctccgcatattgacattatttggcgtcatcttttt
cataaaatatctcactcttttttagagcatgaagaaaaaatacaatcttcaatagaaaaa
atttttgttaatattcctgctaaaatggcaatagaatctattggaattcatcttactggt
tttgctgaccgcattgatctattaaaatcaggatttgttgatatcacagattacaaaact
ggcgataatccaaaaaaagaaaccgctcagaaactgattgatccacaactttcattagaa
gcagcagctttgaaagctggatctttttctcaaattgattgtagaaaagttgcaaacctt
ttttacataagactcaaacaaaaatttaaaattgattgtattacaaatgataaaaaaaaa
tattctgcagacgaactttcagaaaaatccctcaagaatttaatcgagattgtaacatta
ttacaaaatggtgaacaaccctttatatcacatttacgtctttcagaaaaatctaatatt
cagagtgaatatgatcaccttgcccgcgtagcagaatggagagaagaatatgatatatca
taa
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