Candidatus Liberibacter asiaticus psy62: CLIBASIA_04075
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Entry
CLIBASIA_04075 CDS
T00948
Symbol
atoC
Name
(GenBank) putative sigma-54-dependent transcription regulator protein
Organism
las
Candidatus Liberibacter asiaticus psy62
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
HTH_50
HTH_7
HTH_17
HTH_23
RWP-RK
BrxC_BrxD
TrkA_N
HTH_28
FleQ
HTH_Tnp_Tc3_1
TetR_N
HTH_22
HTH_29
AAA_5
Sigma70_r4
HTH_Tnp_1
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
ACT57389
UniProt:
C6XG86
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Position
895380..896828
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AA seq
482 aa
AA seq
DB search
MPRKKSLDRHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQVNVIFLSL
INCEDDKENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSI
ICALREGVVPSQENEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLS
RFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLE
EPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYY
RISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQE
LKNILLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQ
ESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNIEVD
SL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaaaaaagagcctagatcgccataaacgggttttaattatagataaggatgat
gaacaaatcaagattattaaagatcatgtagaatcatacggatatgacgtttttattgtt
aatgtttctgatctatcaactataagtaaaatacaggtaaatgtaatttttttaagtctt
ataaactgtgaggatgataaagaaaatattttaaagaatattgtagataaaataccaatc
gttccgattattgtgcagacgacacaagataatatcaagattcttaattgttttctatat
aatagaatttctaaattttttttaaatcttgtttcaagaaaacaactttgcgattctata
atctgtgctctcagggagggtgtagtaccttctcaagaaaatgaacattgcgcgttagat
tcattaattgcagtgagtcctgctatgattcaagtggtagatttggcacggaaggcggga
gattgtgcgattccaataatgatacaaggggaatttggtgttggaaagaagagattatcg
cgttttattcatgaatctggaaaacgcgcttttttccctttttttattgttaattgtgga
atgattgatcaggataaaattgagaaatttctatttggtgatgtagatctacaaactaaa
aatagtgcacagtttcttggaaaatttattgaagcaaacggagggactatcgttttagaa
gaaccagatgcgcttcctcttgcagtacaaggaaggatttacaatttcattgagacgggg
aaaattgaattttttgattctcgaggcgctatcagactagatgtgcgccttatttttttg
acagagaaaaacttacttccacaggtcaaatctcatgtatttcgtaaagatctttactat
agaattagtgtttttcttatcaatatttctacattacgtagtcgttcagaggatatccca
tggttagtgcattttttcttacaatctttttgcacaaagaatgctataaagcagattagt
atatcagataaagcattgtctctgttaaccaagtatccttggattgataatgtgcaagag
ctgaaaaatattctactgcgagctgtaatcgggcttaaagatagtcatcttacagaagat
cgttttgttttattgttatcgagagaaggaaaaaaagagagagaatttcatacagagaca
gcatgtacttgttatacagaaggtaaaagtagtgataccatactagataatctttcacag
gagagtattcctgctattggtcaagatggagaagtacgtcgtttatctgatattgaaaag
gaaataattggattagcaatgaaattatatcgagcacagatgagtgaagttgcgagaagg
cttggtatagggcgttctaccctttatcgtaagattagagaatataatattgaagttgat
agtttgtaa
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