Candidatus Liberibacter asiaticus psy62: CLIBASIA_04095
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Entry
CLIBASIA_04095 CDS
T00948
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
las
Candidatus Liberibacter asiaticus psy62
Pathway
las00521
Streptomycin biosynthesis
las00523
Polyketide sugar unit biosynthesis
las00525
Acarbose and validamycin biosynthesis
las00541
Biosynthesis of various nucleotide sugars
las01100
Metabolic pathways
las01110
Biosynthesis of secondary metabolites
las01250
Biosynthesis of nucleotide sugars
Module
las_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
las00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLIBASIA_04095 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLIBASIA_04095 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CLIBASIA_04095 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLIBASIA_04095 (rfbB)
00525 Acarbose and validamycin biosynthesis
CLIBASIA_04095 (rfbB)
Enzymes [BR:
las01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CLIBASIA_04095 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
NAD_binding_4
Sacchrp_dh_NADP
KR
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ACT57393
UniProt:
C6XG90
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All DBs
Position
902150..903226
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AA seq
358 aa
AA seq
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MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC
DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ
DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL
LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG
RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK
IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNRK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctaattgtgacaggaggggcaggttttattggttctgcattgtgtcgatattta
gtaaatgatctaaaaatacaagttttggtcatagataaattaacttatgctgggaattta
aattctttaaaagagatttctcaaagtaatttattttcatttttacaagtagatatttgc
gatagagagtgtattcgttctgctttaaaggaatttcaacctgatgctattgtgaatttt
gctgcggaaagtcacgtagatcgttctattttaggagcagatgaatttattactaccaat
atcattggtacttttattttattggaagaaaccagattatggtggtcatgcttgtctcaa
gacaaaaaagatcaatttcgttttttgcagatctcaacagatgaagtctatggatcttta
gataaggggttgttttctgaagatatgccatataatccatcctctccttattctgctaca
aaagcttcttcagattatttagtgctggcatggggacatacatacggcattccagttctt
ttgtctaattgttctaataattacgggccttatcactttcctgaaaaattaataccttta
gcgattacaagaatgatagaaggatcgcatgtctttctttatggtgatggtcaaaatgta
cgtgattggctttatgtcgaagaccacgtgcgcgcattatatttagtgcttaaaaaaggg
aggattggtgagagatataatattggtggcaataacgaaagaaaaaatattgatattgtt
ttcgagattggctttttattggatgcattaattccaaaatcttattcccatactgaatta
attcgttttatagaagatcgtccaggacatgatcgtcgttatgctattgattcttctaag
attaaatctgaaataggatggtttccacaggaaaatatggagagtggactaaataaaact
gtgtgttggtatttggataataactggtggtggcgtcctttatataaagaattgaaacct
gataatgattattccaaatggaaaaatttaaatgaaatgtcttgtaatcggaaataa
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