Candidatus Liberibacter asiaticus psy62: CLIBASIA_04180
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Entry
CLIBASIA_04180 CDS
T00948
Symbol
ropZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
las
Candidatus Liberibacter asiaticus psy62
Pathway
las03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
las00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLIBASIA_04180 (ropZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
las03021
]
CLIBASIA_04180 (ropZ)
03400 DNA repair and recombination proteins [BR:
las03400
]
CLIBASIA_04180 (ropZ)
Enzymes [BR:
las01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLIBASIA_04180 (ropZ)
Transcription machinery [BR:
las03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLIBASIA_04180 (ropZ)
DNA repair and recombination proteins [BR:
las03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLIBASIA_04180 (ropZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ACT57410
UniProt:
C6XGA7
LinkDB
All DBs
Position
928042..928410
Genome browser
AA seq
122 aa
AA seq
DB search
MARTTVEDCIDKVDNRFLLVLLASHRTRHLSQGAKPTVDVGKDKNTVVALREIASGTLSP
DDLEEDFIHSLQKHVEIDEPDSPTENSDFSWHKPEALSFGQMSEGDLLEGINNIVTPDKR
DD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtactactgtagaagattgtattgataaggtagataaccgattcctgctcgtt
cttctggcgagccatcgtacaaggcatctatcccagggagcaaaaccgacagttgacgtt
gggaaggataagaatacggtcgtagcgttgcgcgagattgcaagtggtactttgtcgcca
gatgatcttgaagaggattttattcattctcttcaaaagcatgttgagattgatgaacct
gatagtcctactgagaattctgatttctcatggcacaagccggaggctttgtcatttggg
caaatgtcagaaggagatctcttagaagggatcaataatatagtcactcctgataagaga
gatgattga
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