Lawsonibacter asaccharolyticus: L9O85_01445
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Entry
L9O85_01445 CDS
T07961
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lasa
Lawsonibacter asaccharolyticus
Brite
KEGG Orthology (KO) [BR:
lasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lasa03009
]
L9O85_01445 (rlmD)
Enzymes [BR:
lasa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L9O85_01445 (rlmD)
Ribosome biogenesis [BR:
lasa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L9O85_01445 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_11
PrmA
Methyltransf_15
PCMT
Ubie_methyltran
Methyltransf_4
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
UMM47114
LinkDB
All DBs
Position
309505..310866
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AA seq
453 aa
AA seq
DB search
MAEVRKNTVHPLHIEGYTAEGMGVARLDGRVVFIPGTIRGEDWEVQLLKVNKGVAWGKGT
RLISPSPVRQEPDCPYSGRCGGCQYRHMSYEEELAAKGQRVRDALERVGGVHLELPPVLG
AESPLRYRNKVQFPVSRGKCGLSIGFYRPRSHDVVDTEDCLLQPEADTALRLAFKGWMED
FQIPAYDECTGRGLIRHLYIRTNRAGEALCCVVANGKELPHTGELSGALRAAVPKLAGLV
LNVNLRDTNVILGDAYRTLWGRDWLEEELCGLTFRLSVPSFFQINRDQTERLYQLALEFA
GLTGEETVLDLYCGIGTISLCLARRAGHVIGAEVVPQAIEDARANALRNGVTNAEFFCGD
AGEVAARLAGQGVRPQVICVDPPRKGLAPEVPAVLSSMAPDRIVYVSCDPATLARDVKRL
EELGYRAVQAQPVDLFPRTAHVETVLRMERRNR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcagaaaaaacacagtgcatcccctccatatcgagggctataccgcggaa
ggaatgggggtggcccgtctggacggccgggtggtcttcattcccgggaccatccggggg
gaggactgggaggtccagctgctcaaggtgaacaagggtgtggcctggggcaaagggaca
cgcctgatctccccctcccccgtccggcaggagccggactgcccttacagcgggcggtgc
ggggggtgccagtaccgccacatgtcctatgaggaggagctggcggccaagggccagcgg
gtgcgggacgccctggagcgggtgggcggcgtccatctggaactgcctccggtgctgggg
gcggagtcccccctgcgctaccgcaacaaggtgcagttccctgtctcccgaggaaagtgc
gggctgtccatcggcttttaccgccccaggagccatgacgtggtggacacggaggactgc
ctgctccagccggaggcggatacggccctgcgtctggccttcaagggctggatggaggac
tttcagatccccgcctatgatgagtgcaccggccgggggctgatccggcacctgtatatc
cgtaccaaccgggcgggggaagccctgtgctgcgtagtggccaacgggaaggagctgccc
cacaccggagagctgtccggtgccctgcgcgccgctgtccccaagctggccgggctggtc
ctcaatgtgaatctccgggacaccaatgtgatcctgggcgatgcgtaccgcaccctctgg
ggccgggactggctggaggaggagctgtgcgggctcactttccgcctgtccgttccctcc
ttcttccagatcaaccgggatcagacggagcggctgtaccagctggcgctggaattcgcc
gggctcaccggggaggagacggtgctggacctgtactgcggcatcggcaccatctccctg
tgcctggcccgccgggccgggcatgtcatcggggcggaggtggtcccccaggccatcgag
gacgccagggccaacgccctgcgcaacggtgtcaccaacgcggaattcttctgcggggac
gcgggggaggtggcggcccgcctggccggccagggcgtgcgtccccaggtcatctgcgtg
gacccgccccgcaaagggctcgccccggaggtgccggcggtgctgtcctccatggcgccg
gaccgcatcgtctacgtctcctgcgacccggccaccctggcccgggatgtgaaacggctg
gaggagctgggctaccgggccgtccaggcccagccggtggatctgtttcccaggaccgcc
catgtggagacggtgctgcggatggaacgaaggaatcgctaa
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