Lawsonibacter asaccharolyticus: L9O85_04340
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Entry
L9O85_04340 CDS
T07961
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lasa
Lawsonibacter asaccharolyticus
Pathway
lasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L9O85_04340 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lasa03400
]
L9O85_04340 (uvrB)
DNA repair and recombination proteins [BR:
lasa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L9O85_04340 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L9O85_04340 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UMM47650
LinkDB
All DBs
Position
940973..942946
Genome browser
AA seq
657 aa
AA seq
DB search
MPRFEVVSEYTPSGDQPEAIEALASGLEMGLDEQTLLGVTGSGKTFTMAKIIEKVQRPTL
VLAHNKTLAAQLCAEFREFFPHNAVEYFVSYYDYYQPEAYIPHTDTFIEKDSAINEEIDR
LRLSATASLMERRDVIVVSSVSCIYGLGEPEDFAKMMVSLRVGATLERDELLKKLVAIRY
ERNDIAFDRNMFRVRGDTVEIWPAYWKDTALRVEFFGDEIDRISEINVVTGTPIRRLNNI
PIWPATHYVTPKEKMDAAIQEIYKELEERVAFFEGEGKLVEAQRLKQRTMYDVEMMQELG
YCSGIENYSRVIEGRPVGSPPHTLLDYFPKDFVLFIDESHVTLPQVRAMYNGDRARKTTL
VDYGFRLPCAFDNRPLKFEEFEKRLNQVVYVSATPGEYERTRSGQIVEQVIRPTGLLDPR
IEVRPVEGQIDDLIGEINQRTQRSERVLVTTLTKRMAEDLTAYLQNAGIKVRYMHHDIDT
IERMEIIRDLRLGTFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNADGMVVMYADTITPSMRRAIDETERRREKQDAFNKAHGIVPRTVIKSVRELLEISAT
AEDVASNQRQGRVKAMTRQEKAAEIARLEKAMKEAAKMLEFELAATLRDQIIELRGK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatttgaagtggtttcagaatacacccccagcggggatcagccggaggccatc
gaggccctggccagcggactggagatggggctggacgagcagacgctgctgggcgtcacc
ggctcgggcaagaccttcaccatggccaagatcatcgaaaaggtccagcggcccaccctt
gtgctggcccacaacaagaccctggccgcccagctgtgtgccgagttccgggagttcttt
ccccacaacgcggtggagtacttcgtctcctactacgactactaccagccggaggcctat
atcccccacacagacaccttcatcgaaaaggattccgccatcaacgaggagatcgaccgg
ctgaggctgtccgccaccgcctccctgatggagcggagggacgtgatcgtggtctcctcc
gtctcctgtatctacggtctgggcgagccggaggacttcgccaaaatgatggtctccctg
cgggtgggggccaccctggagcgggacgagctgctgaaaaagctggtggccatccgctat
gaacgcaacgatatcgcctttgaccgcaacatgttccgggtccggggggacacggtggag
atctggcccgcctattggaaggacaccgccctgcgggtggagtttttcggggacgagatc
gaccgcatcagcgagatcaacgtggtcaccggcacccccatccgccggctgaacaacatc
cccatctggccggccacccactatgtcacccccaaggagaagatggacgccgctatccag
gagatctacaaggaactggaggagcgggtggccttcttcgagggagagggcaagctggtg
gaggcccagcggctgaagcagcgcaccatgtacgacgtagagatgatgcaggagcttggc
tactgctccggcatcgagaactattcccgggtcattgaggggcggcccgtgggctcgccc
ccccacaccctgctggactacttccccaaagacttcgtcctcttcatcgacgagagccac
gtcaccctgccccaggtgcgggccatgtataacggggaccgggcccgaaagaccaccctg
gtggattacggcttccggctcccctgcgcctttgacaaccggccgctgaaatttgaggaa
tttgaaaagcggctcaaccaggtggtctatgtctccgccaccccgggggagtatgagcgc
acccgctcgggccagatcgtggagcaggtgatccggcccaccgggctgctggaccccagg
atcgaagtcaggccggtggagggccagatcgacgacctgatcggggagatcaaccagcgc
acccagcggagcgagcgggtgctggtcacaaccctgaccaagcggatggcggaggacctg
accgcctacctccagaacgcgggcatcaaggtgcgctatatgcaccacgacatcgacacc
atcgagcggatggagatcatccgggacctgcggctgggcaccttcgacgtgctggtgggc
atcaatctgctccgggagggcctggacctgcccgaggtctccctggtggccatcctggac
gcggacaaggagggcttcctccggtccgagacttccctcatccagaccatcggccgggcc
gcccggaacgccgacggcatggtggtgatgtacgcggacaccatcaccccctccatgcgc
cgggccatcgacgagacggagcgccgccgggagaagcaggacgccttcaacaaggcccac
ggcatcgtccccagaacggtcatcaagtcggtgcgggagctgctggagatctccgccacg
gcggaggacgtggcctccaaccagcgccagggcagggtcaaggccatgaccaggcaggag
aaggccgccgagatcgcccgcctggagaaggccatgaaagaggcggccaagatgctggag
ttcgagctggcggcaactttgagagaccagatcatcgaactgcgggggaagtga
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