Lawsonibacter asaccharolyticus: L9O85_10020
Help
Entry
L9O85_10020 CDS
T07961
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
lasa
Lawsonibacter asaccharolyticus
Pathway
lasa02020
Two-component system
lasa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L9O85_10020 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L9O85_10020 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lasa03021
]
L9O85_10020 (rpoN)
Transcription machinery [BR:
lasa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L9O85_10020 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_36
HTH_23
HTH_IclR
HTH_11
MarR
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UMM45914
LinkDB
All DBs
Position
2098688..2100043
Genome browser
AA seq
451 aa
AA seq
DB search
MELVQRQTQQLTQQTLQSLALLQMSTVELEAYVQELAQENPIIDLEPPRSEQEVPRDQEL
FRRVKWLEDSDRQNRYYQRLDAEELDPLAQVGTDGGLEESLSNFLFRQIQQLDLDESAKQ
LLCYLSACLDEDGYFRIPLDELSRTSGISQRRLARTLELLRSLEPAGVGASSLSQCLELQ
LLRIHEEGPALAIVRDCLEELAKKHYHAISARLSISQEEVRSAERLIRELNPRPGSIFAL
PSEISYIQPDILIEEIDGHFTARLRNSDRPYFQINSYYRSLLTQSDDAQVREYLTLKLRQ
AENVLWAIGQRETTLLRCAQAIAGRQQDFFRSGPSALRPLRLSDIAQELEIHESTVSRAI
RDKYVQCPRGVFPLRHFLSRRAAGESGAEVGSCAAKELLRRLIREEDSTKPLSDQKLCTL
LTEQGCPISRRTVAKYREELNIPSASGRKRP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaactggtccaacggcagactcaacagctcacccagcagacgctccagagcctcgcg
ctccttcagatgagcacagtggaattggaggcttatgttcaggagctcgcccaggagaac
cctatcatcgatctggagccgccccgctccgagcaggaagttccccgggatcaggagctc
ttccgccgtgtgaagtggctggaggacagcgaccgtcaaaatcgctattaccagcgcttg
gacgccgaggaattggacccgctggcccaggtggggacggatggcggtctggaggaatcc
ctctccaattttctcttccgccagatccagcagctcgatctggatgagtctgccaagcag
cttctgtgctacctgtccgcctgtctggacgaggatgggtatttccgcatcccactggac
gagctctcccggacttctggcatctcccaaaggcggctcgcccgcactctggagctactg
cgctccctggaacccgcaggtgtgggggcttcctccctctcccagtgtctggagcttcag
ttgctccgcatccatgaggagggccccgcccttgccattgttcgggactgcctggaggag
ctggccaaaaaacattatcatgccatctccgcccgcctctccatctctcaggaggaggtc
cggtccgccgaacggctgatccgagagctgaatccccgtcccggttccatcttcgcgctc
cccagcgagatctcctatattcagccggatattttgatcgaagagatagacggacatttc
actgcccgcctgcggaacagtgaccgtccctacttccagatcaactcctattaccgcagt
ctcctgacccagtccgatgacgcccaggtgcgggaatatcttaccttgaagctccgccag
gccgaaaacgtgctctgggccattggtcagcgggagaccacgcttctccggtgtgcccag
gctatcgccggccgccagcaggacttcttccgatcggggcccagcgccctgcggcccctg
cgcctgtccgacatcgcccaagagctggagatccatgaatccacggtcagccgcgccatt
cgggacaaatatgtccagtgtccccggggggtctttcccctccgtcattttctctcccgc
cgggccgccggggagagcggtgccgaggtcggcagctgtgccgccaaggaactgctccgc
cgcctgattcgggaggaggacagcaccaagcctctctccgaccagaagctatgcacccta
ctgacggagcagggctgccccatctcccgccgtaccgtggccaaataccgcgaggagctg
aacatccccagtgcctctgggagaaagcggccgtag
DBGET
integrated database retrieval system
