Lawsonibacter asaccharolyticus: L9O85_13165
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Entry
L9O85_13165 CDS
T07961
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lasa
Lawsonibacter asaccharolyticus
Pathway
lasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L9O85_13165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lasa03019
]
L9O85_13165
Enzymes [BR:
lasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L9O85_13165
Messenger RNA biogenesis [BR:
lasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L9O85_13165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UMM46498
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All DBs
Position
2744501..2746333
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AA seq
610 aa
AA seq
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MTFRDLGLIAPILSALEEQGYTRPSPIQEKAIPPALEGRDVLGCAQTGTGKTCAFAAPIL
QRLSAAPVKGRPIRALILTPTRELAIQIGDSFQAYGSHLSLRHAVIFGGVGQNPQVEALN
RGVDILVATPGRLMDLHDQGFVHLEQLEIFVLDEADRMLDMGFIHDVKKILKWLPARKQT
MLFSATMPPEIADLVNSLLRSPVRVAVDPVSSPVEAIRQSVYFVDKGNKTRLLAQLIQEL
AVKNALVFTRTKHGANKVARELSKYGITAAAIHGNKSQTARQQALADFRAGKLQALVATD
IAARGLDIEELSHVFNYNLPEVPETYVHRIGRTGRAGRGGEAIAFCDFSEKPLLREIEKL
THRSIPVVEEHPWPMQVFELPKKDKNGRTINEEDAEARAAARELRREREAARQAAAQEKQ
EKSAQASAPSPEATVEGGEKKKRRRRRSKSKGEAPAAPAESPLPAQAPARPKLTRPGTRL
ETGSAMPCTEFDRPDPLAGDRIMDATARLLAPRRLTLSPVSSREEHGRPRKRSAGQAAQP
RQKSEGQKGRSAHTAPQAESRKPAPSKHKKSSQGRGQDRRRSFQDPPRPTGHPKDSTEQE
SLMKPYYLDI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcgcgacttagggctcatcgcccccatcctctccgccctggaggaacagggc
tacacccggccgtcccccattcaggagaaggccatcccccctgccctggaagggcgtgac
gtgctgggctgtgcccagaccggcacaggcaagacctgcgcctttgccgcccccatcctt
cagcggctcagtgccgccccggtgaagggccgccccatccgcgccctgatcctcaccccc
acccgggaactggccatccagatcggtgacagcttccaggcctatggcagccatctgtcc
ctgcgccacgctgtcatcttcggcggtgtgggccagaacccccaggtggaggccctcaac
cggggggtggacatcctggtggccacccccggccggctgatggacctccacgaccagggg
ttcgtccatctggagcagctggagatcttcgtgctggacgaggccgaccgcatgctggac
atgggcttcatccacgacgtgaagaagatcctgaagtggctgcccgcccggaagcagacc
atgctcttctctgccaccatgccgccggagatcgccgatctggtcaactctctcctccgc
tcccctgtccgggtggcggtggacccggtctcctcccctgtggaggccatccggcagtcg
gtgtacttcgtggacaagggcaataagacccggctgctggcccagctgatccaggagctg
gcggtgaaaaacgccctggtctttacccgcaccaagcacggggccaacaaggtggcccgg
gagctgagcaagtacgggatcaccgccgccgccatccacggcaacaagagccagaccgcc
cgccagcaggccctggccgacttcagggccgggaaactccaggccctggtggccactgac
atcgccgcccgggggctggacatcgaagagctgtcccatgtcttcaactacaatctgccc
gaggtgcctgagacctatgtccaccgaatcggccggaccggacgggcgggccgtggcggc
gaggctatcgccttctgcgacttctccgagaaacctctgctccgggagatcgaaaagctg
acccaccgctccatccccgtggtggaggagcacccctggcccatgcaggtcttcgagctt
cccaaaaaggataagaacggccgcactatcaatgaggaggacgccgaggcccgagccgcc
gcccgtgagctgcgccgggagcgggaggccgcccgccaggccgcagctcaggagaaacag
gagaagtccgctcaggcttctgccccgtccccagaggccacggtggagggcggagagaag
aagaagcgccgccgcaggcggagcaagtccaagggggaggcgcccgccgccccggcggag
tccccgctgcccgctcaggctcccgcccgccccaagctgacccggcccggcacccgcctg
gagacgggcagcgccatgccctgcactgagttcgaccgccccgaccccctggctggagac
cggatcatggacgccactgcccgtctgctggctccccgccggctgactctctccccggta
tcctccagggaggagcacgggcgcccccgaaagcgctctgctggacaggccgctcagccc
cgccagaagagcgagggccagaagggccgctctgcccacaccgccccccaggcggagagc
cggaagccggcgccgtccaagcataaaaagtcctcccagggccgcgggcaggaccgccgc
cgctccttccaggacccgccccgtcccaccggacatcccaaggactccaccgagcaggaa
agcttgatgaagccctattacctggatatctga
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