Candidatus Liberibacter asiaticus Ishi-1: CGUJ_01350
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Entry
CGUJ_01350 CDS
T03607
Name
(GenBank) type I secretion system ATPase, PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CGUJ_01350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lat02000
]
CGUJ_01350
02044 Secretion system [BR:
lat02044
]
CGUJ_01350
Transporters [BR:
lat02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CGUJ_01350
Secretion system [BR:
lat02044
]
Type I secretion system
Multiple protein transporter
CGUJ_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
PhdYeFM_antitox
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAP26143
LinkDB
All DBs
Position
274791..276488
Genome browser
AA seq
565 aa
AA seq
DB search
MYHLKYSANFMKIYFSFFCITILPSFFINILYLTNPLYMMHIYDSVIGTQSKINLIALST
ITLFLYALFFGFDLIRSRLLIESSHLIERFFKPYIITVTKKYEMDGTSLFSIISSLDQLK
QFITSPVLPALLDILFTPIFIILSFCIHPILGSWAILSGILLLTITILFQANNERLERRY
KKSRQDEINFGKAILHNSEYIYAPSTRDFLLTYWNKKRATSQEYQSLIAKKYYFGISVTK
TLRMTLQSSILGIGAWLVIHQKLSAGAIIATSIITARAMAPLEQIINSKKSLNVGLKSLK
YLINLNDFTTLLNSSDSKKEPISMRLSNNTITAKNIVFRDKKTSRLICQNLSFTIPEGSC
CIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGDRQISRDFIEKFSAQIGYLSQHCSLFPI
SITENIILSHDQNSLHIAQKTAKIVGCHEDILSLKNGYQTTYCSDEIPYNIVQKIRLSRI
IANNPAILLMDEPLYHLDNEAKNNFYTLLKQFKENKKTIVIISHDPTIISMSDFSLIFHP
IQGSLFGLTQDIFKFNTVTHNQIKI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacttaaaatactctgctaattttatgaaaatatacttctcatttttttgtatt
actatattgccgagtttttttataaatattctttatttgactaatcctctatacatgatg
cacatctatgatagtgtcatcggtacgcagagcaaaattaatctgatcgccttaagcacc
ataacacttttcctctacgcactattctttggttttgatttaatacgctcaagactactt
atagagtcatctcatttgatagaacgtttttttaaaccttatatcataaccgtgactaaa
aaatatgaaatggatggcacatctcttttctccatcatctcatcactagatcagctcaaa
caatttatcacgtcacctgtgttacctgccttgcttgacatcctattcactccaatcttt
attatactaagtttttgtattcacccaatattaggatcttgggcaatcctaagtggaatc
ctactgcttactataactattttatttcaagctaataatgaacgattagaacgcagatac
aaaaagagtcgacaagatgaaataaatttcggaaaagcaatactgcataattcagaatac
atatatgctccttccacacgtgattttttattaacatattggaataaaaaacgtgctact
tcacaagaatatcaatcacttatcgcaaaaaaatactattttggaatctctgtaacaaaa
acactccgcatgactttacagtcttcaattctagggattggcgcctggttggttatccat
caaaaattatcggctggtgctattatagcgacttccattattactgctcgagcaatggca
cccttagaacaaatcatcaattcaaaaaaatctctgaatgtaggccttaaatctttaaaa
tatctcataaatttaaatgattttaccactcttttaaattcatccgattcgaaaaaagag
cccataagcatgcgcctatccaataataccattaccgcaaaaaacatagtattccgagat
aaaaaaacatctcgtcttatttgtcaaaatctatcttttactatcccagaagggtcttgt
tgtattattgctggaccaagtggatgcgggaaaagcaatttcttactttgcatgctcggt
ttacttacactagaaaaaggcactatttcttttggtgacagacaaatatctcgcgatttc
attgaaaaattttctgcacaaattggttatctttcacaacactgtagtttatttcctata
agcattacagaaaatatcatcctatctcatgatcaaaactcattacacattgcccaaaag
acagcaaaaatcgtaggatgccacgaagatattttatcccttaaaaatggatatcaaact
acttattgttctgatgaaatcccttataatatcgtacaaaaaatccgtttatcacgcatc
atagctaataatcctgcaattcttttgatggatgagccactctatcacttagataatgaa
gcgaagaataacttctatacactgctcaaacaattcaaagaaaataaaaaaacaattgtc
ataatatctcatgatccaacaattatcagcatgtcagatttttcgctgatattccatcct
atacaaggctccctttttggactaacacaagatattttcaaattcaataccgtcactcac
aatcagataaaaatttaa
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