Candidatus Liberibacter asiaticus Ishi-1: CGUJ_02195
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Entry
CGUJ_02195 CDS
T03607
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGUJ_02195 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_02195 (ruvB)
Enzymes [BR:
lat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGUJ_02195 (ruvB)
DNA repair and recombination proteins [BR:
lat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGUJ_02195 (ruvB)
RecFOR pathway proteins
CGUJ_02195 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_14
nSTAND3
AAA_17
Rad17
ResIII
AAA_3
AAA_18
TsaE
AAA_33
NTPase_1
NB-ARC
RNA_helicase
AAA_16
AAA_24
NACHT
AAA_7
MCM
AAA_28
AAA_25
IstB_IS21
ABC_tran
Parvo_NS1
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
BAP26529
LinkDB
All DBs
Position
719866..720870
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AA seq
334 aa
AA seq
DB search
MMDREGLLSRNVSQEDADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFV
GPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAGDLAALLTNLEDRDVLFIDEIHRLSII
VEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRL
NFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAKT
ITREIADAALLRLAIDKMGFDQLDLRYLTMIARNFGGGPVGIETISAGLSEPRDAIEDLI
EPYMIQQGFIQRTPRGRLLMPIAWQHLGIDIPHR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcgtgagggattgctatctcgtaatgtttctcaggaagatgctgatatctct
ttactgcgtccgagaactttagaggaatttacaggtcaagttgaagcgtgttctaatctg
aaggtttttatagaagcagcaaaggcgcgtgctgaagcgttagatcatgtattatttgta
ggtcctccaggtcttggtaaaactactttggcacaggttgttgcaagagaattaggggtt
aactttcgttcgacttcgggtccagttattgcgaaagcaggggatcttgcagcgttgctt
accaatttagaagatcgggatgttctatttattgatgagattcatagactcagtattatc
gtagaagagattctttatccagctatggaagattttcaattggatctcatggtcggggag
ggaccatctgcacgttctgtaaaaattaatttatcacgttttactctcattgccgcaacg
acaagagttggtttgcttaccaatcctttacaggatcgttttggtattcctattagatta
aatttttatgaaattgaggatttaaaaactatagtacagagaggggctaaattaacagga
ttggctgttacagatgaagcggcatgcgaaattgctatgcgttctagaggaactccacgt
attgctggcagattattgcgtcgtgtacgagattttgctgaagttgcacatgctaagact
attacgagggaaatcgcagatgcggcgctgcttcgtttagcaatcgataaaatgggtttt
gatcaacttgatttgcgttatttgacaatgattgctcgtaattttggaggtggtccagtt
ggaatagaaaccatttccgcaggtctttccgaacctcgagatgctatagaggatttaata
gagccttacatgatacaacaaggatttattcaacgtacgccacgtgggagactcttaatg
cccattgcttggcaacatcttggtattgatattccccataggtag
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