Candidatus Liberibacter asiaticus Ishi-1: CGUJ_02485
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Entry
CGUJ_02485 CDS
T03607
Symbol
rluD
Name
(GenBank) RNA-pseudouridylate synthase protein, ribosomal large subunit D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lat03009
]
CGUJ_02485 (rluD)
Enzymes [BR:
lat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CGUJ_02485 (rluD)
Ribosome biogenesis [BR:
lat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CGUJ_02485 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BAP26473
LinkDB
All DBs
Position
complement(657575..658597)
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AA seq
340 aa
AA seq
DB search
MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKN
PNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGT
LVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTR
LKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKN
SNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLA
RQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNEK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagacattagataattgctcttctataaaaatttcattgttatccgatagcaca
gcagaaggaagaatagatagatggttagccaccagtttaaaagagcaattttcaagatct
tacgttaaaatactcatcctcaatggctttattagcattaatggcatggtttccaaaaat
ccaaatagaaaagttgttcctggggacagtttcttgattactgttcctgcagcacaaaaa
ttaaatattgctcaagaaaacatccctcttgatatcttatatgaggatgatgatataatt
gtcatcaataaaccagcaggtctcgtggtacatcctgcacctggtaattggacgggaact
ttggtcaatgcacttttatatcactgtcataataatctttctagcatcaatggcgtaaag
cgccctggaattgtccatagactagataaagatacaacaggagtcatggtagtcgccaaa
aatgatcttgcacatcaaaaactttcagaacagttcgttgatcatggaaagagtacaaga
ttaaaacgtgcctattatgcaatggtatggggaataccgttaccagattctgggataatt
aacgctcctctaggacgttgcaaatcgaaccgcttacgacgtgctgtaaaaggaatagac
gataaaacagcagatagtgctatcacgcattaccaaacaatcgaaatctataataaaaac
tctaattttgcagtctccttattaaagtgtcatttagaaacagggagaacacaccaaatt
cgtgtacacatggctcataaaggaaatccactaattggcgatcctttatatggaaaaggg
tttaaaacaaaagcaaatatcgttaataacaatgcaaaaagtgctattttatcccttgca
cggcaagcattgcacgcgcattccttgtcatttagtcatcctcgtaacaatcaagatatg
gattttcaagtgcctattcccgaagatatgttaactgtaatccgaaaattaaacgaaaag
taa
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