Candidatus Liberibacter asiaticus Ishi-1: CGUJ_02985
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Entry
CGUJ_02985 CDS
T03607
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat00300
Lysine biosynthesis
lat00470
D-Amino acid metabolism
lat01100
Metabolic pathways
lat01110
Biosynthesis of secondary metabolites
lat01120
Microbial metabolism in diverse environments
lat01230
Biosynthesis of amino acids
Module
lat_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CGUJ_02985 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CGUJ_02985 (dapF)
Enzymes [BR:
lat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CGUJ_02985 (dapF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAP26375
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All DBs
Position
547584..548474
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AA seq
296 aa
AA seq
DB search
MQSSMVDFAKMEGIGNKILVIDMRGCHDNITSDAINALSTDDNTHFDQIMLIHDFQDASV
DAFIRIINCDGSEVQSCGNGMRCVVRFLTSRMKRKSFTFETIRGILVAKENRDGSISVDM
GEPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDL
ASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLH
KTNRAVSVKMLGGGLLIEWHDNNHVFMTGEAKKEWEGKLDIKTGKWIKKNEDDEAY
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcatctatggtagattttgcaaaaatggaagggatagggaataaaattcttgtc
attgatatgcggggttgtcacgataatataacctcagacgcaattaatgctctatccacg
gacgataatacccattttgatcaaattatgttaattcatgattttcaagatgcatctgtc
gatgcctttattcgtattataaactgtgatggatccgaagtgcagtcttgtgggaatggg
atgcgttgtgttgtgcgatttcttacgtctaggatgaagagaaagtctttcacttttgaa
accatacgaggaattttagtggctaaagaaaatagggatggatcgatctctgttgatatg
ggtgagccgattttggattggaagctcattcctctggcacgatcatttgataagatggat
agggatcgatttcatataggtccagttaatcacttgtttttgcggaatccgtttgtggtt
tctatggggaatccacatgcaattttttttgtagaagatgacttatatcattatgacctt
gctagttttggaaatcttttagcaaagcatcctatgttttcggaaggtgttaatctttct
atagcacgggttacttctttagaatctcttgatttacgcacttgggagcgtggcgtaggt
ttaactgctgcctgtggatcagctgcttgtgcttctgttgttgcgtctggatgtttgcac
aagacaaatcgtgcggtatcagttaagatgttgggaggagggcttttgattgagtggcat
gataataaccatgtttttatgactggagaggcgaaaaaagaatgggaggggaaactggat
attaaaacggggaaatggataaagaaaaatgaggatgatgaggcatattaa
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