Candidatus Liberibacter asiaticus Ishi-1: CGUJ_03410
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Entry
CGUJ_03410 CDS
T03607
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CGUJ_03410 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_03410 (xseA)
Enzymes [BR:
lat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CGUJ_03410 (xseA)
DNA repair and recombination proteins [BR:
lat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CGUJ_03410 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Adhesin_P1_C
Motif
Other DBs
NCBI-ProteinID:
BAP26291
LinkDB
All DBs
Position
complement(460725..462314)
Genome browser
AA seq
529 aa
AA seq
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MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN
HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL
EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK
VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS
IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI
KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD
FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI
KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA
TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttttctcaaaaaaactctttggaccacccagaatattctgtatcagaacta
tcctaccatctaaaacatatagttgaatcgaatctttctcatgtatgcgtgcgaggggaa
atatctggatatcgaggaatccactcatcaggacacgcatatttctccttaaaagacaat
cactcacgaattgatgctatcatctggaaaggcacactcaacaaaatagagtttcttcca
gaagaaggaatagaatttcttgtcatcgggaaaatcactacttttccaggatcttcgaaa
tatcaaatcatcatagaatccttgatcccatcaggctcgggaacacttctgactgcttta
gaaaaaaggaaaaagaaactactagaagaggggcttttctccgaccaacacaaaaatcct
ataccctttatacccaaaatcattgcagttataacatctcctaccggagcggtcattcgt
gatattttacaaagaatttcctgcagatttcctttgcgagtcattattttcccagtcaaa
gtacaaggagacgaatgccccaaagaaattgccaatgcaattcttcaactaaacacccta
aaagaaggaagaacctgtcctagaccagatattatcattcttgcccgtggtggtggtagc
atagaagatctatggcattttaacgatgaaatgattgtacgagctattgcaaatagctct
attcctatcatatcagccatcggacatgaaaccgattggacacttgctgattatgccgca
gatttacgagcccccactcccacaggagccgcagaaatggcagtccctgtgaaagagcac
ctgcaatcatctctcataaaccttgaagcccgattaaataacataatcattcgattaata
aaatacaaaatcaatacccttaattctttactcaaagctcttccaaactctgatcaaact
ctttcatgttcacgttatagacttgatagattaccccgcgaattagaacacaatcttgaa
atcataatttttcgtaaatatcgtcacttcaaccacataatcaataggataaaatcagat
tttcttatacacaacattcaaaaaaatcgtcaacatatcctagaaaaacaacagcatatt
gaacaaattgtcaaacaacacctacgttatattttcttggaaaaaaaagaaaaaatcgca
attctccacatgctacgcgaacaaacaaaaaatcgcatattctaccttcatactcatata
aaaaagctaatcacccgtatcgaattcatactatcgcataaaataaaaagttgccataca
tctgtctcaattaccacccgaatcttgcaatcctttgcttataaaaacacacttaaacga
ggatatacctctatccaagataccaataataactttatcacccaaaaaagaaacttagcc
accaaaacaagaattctgatcaatttttttgatggacaagccaacgccatcgtaataaat
aaagcccctccaaaggaacagcctacaaagaaatgccaactccataataacaagagggaa
aagcaaggaactcaaggggagttattttaa
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