Candidatus Liberibacter asiaticus Ishi-1: CGUJ_03475
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Entry
CGUJ_03475 CDS
T03607
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03030
DNA replication
lat03430
Mismatch repair
lat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGUJ_03475 (holA)
03430 Mismatch repair
CGUJ_03475 (holA)
03440 Homologous recombination
CGUJ_03475 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lat03032
]
CGUJ_03475 (holA)
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_03475 (holA)
Enzymes [BR:
lat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGUJ_03475 (holA)
DNA replication proteins [BR:
lat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGUJ_03475 (holA)
DNA repair and recombination proteins [BR:
lat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGUJ_03475 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
TRAF6_Z2
Motif
Other DBs
NCBI-ProteinID:
BAP26278
LinkDB
All DBs
Position
complement(443915..444952)
Genome browser
AA seq
345 aa
AA seq
DB search
MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNA
LEIQKNISTFWNEINSTSLFSKKKIILIENLSTEKKVLDCLEEIIIKNICNHIIIIKSNE
IKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGD
RIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFF
LASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRI
WNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQTACKK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatagaatctcataaattcattcaaaaatctacgaaaaatctttttctttct
cattttgtatttattttctatggatcagataaaggattaatatttgaattaattaaccaa
ttcaaaaaaaatataagtattacatatcatgatcccttttctcttgttgtcctaaatgct
ttagaaattcaaaaaaacatatcaacgttttggaatgaaataaactcaacaagtttattt
agtaaaaagaaaattattctaattgaaaacttatctactgaaaaaaaagtgttagactgt
ttagaagaaatcattataaaaaatatttgtaatcatattattattattaagtctaacgaa
ataaagaaaaacaataccttaaggaaaatagcagaaaaatttacatctgttcttgccata
tcttgttatcctgataataaaattcatttgatggacttaatagaggaaagtctcttgata
ggtcaaaaatcaatttccaaagaagcaaaacaaatattacttgcaaatttaggcggagat
cgtatagcttctcggaatgaactccagaaactatcatcttattgcttagaagatattttg
ataacagaacaacatgtaaaagacataatttgtgatacacatgtattgtatattgaagaa
attattaacgctactatacaagggaaaatatacaatgcaattatgctagctgattttttt
cttgcatcaaaaatgccttcacatgcactactacatggatttttacagaaatttcaatta
ctagaaaaaatccatataataaaagaatgctctaatatatctttcgaaaaaataatacaa
aaaactgaaaaaaatattatccctatgaaaagaaatatacttcaagaatccttacgaatt
tggaataaaaatctcgtacgagaaactttacataaaattgaccacagaatccatctagca
cggaaaaaaaaatatcttgaaaaaaatattatattccaaactatattatatattgcacaa
acagcttgtaaaaaataa
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