Candidatus Liberibacter asiaticus Ishi-1: CGUJ_03720
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Entry
CGUJ_03720 CDS
T03607
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGUJ_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lat03019
]
CGUJ_03720
03110 Chaperones and folding catalysts [BR:
lat03110
]
CGUJ_03720
03029 Mitochondrial biogenesis [BR:
lat03029
]
CGUJ_03720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lat04147
]
CGUJ_03720
Enzymes [BR:
lat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CGUJ_03720
Messenger RNA biogenesis [BR:
lat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CGUJ_03720
Chaperones and folding catalysts [BR:
lat03110
]
Heat shock proteins
HSP60 / Chaperonin
CGUJ_03720
Mitochondrial biogenesis [BR:
lat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CGUJ_03720
Exosome [BR:
lat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CGUJ_03720
Exosomal proteins of other body fluids (saliva and urine)
CGUJ_03720
Exosomal proteins of breast cancer cells
CGUJ_03720
Exosomal proteins of colorectal cancer cells
CGUJ_03720
Exosomal proteins of bladder cancer cells
CGUJ_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7162
Motif
Other DBs
NCBI-ProteinID:
BAP26608
LinkDB
All DBs
Position
810839..812494
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKDIKLGTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSI
SFKNHFHEVGARMIRDVATNTEDSSGDGTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGI
DLAVQEVVEYLKANHKKVGSREEIIQVATISANGDREIGEKIAYAMEQIGPHGIITIDQA
KTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKISALQPLLPILESA
TQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEVLRDIAAVVGATV
ISEEIGLKLEKATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDY
DRDKLKERLAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDEGIVPGGGIALV
RAAQALSVKGDNEDQCAGIEIVRKALSYPCRQIIKNAGDESELIVSKIQESKTANYGYNA
QKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLITEAVVVDAPKDETASPQMPAGGGM
GGGMGGMDMMM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagatattaagttgggtactgctgcgcgggatgctattgcatatggtgtt
aatacgcttgccgaggctgtaaaatgtactcttggtcctaaagggcgttgtgttataatt
ggcaattctttcggtgctcctcgcgttactaaggatggtgtcactgttgctaaaagtatc
agttttaagaatcattttcatgaggtcggtgctcgtatgatacgagatgtggcgactaat
acagaagatagttcgggagatggtaccactacggctacttgtcttgctcaagcaatttat
aatgagggtcggaaatatgttaccgcaggtctcaatcctatggacataaaacgtggtatc
gatctcgccgttcaagaagtggttgagtatcttaaggcgaatcataagaaggtgggaagt
cgtgaagaaattatccaggtagcgactatttctgctaacggtgatagagagattggtgaa
aagattgcttatgcaatggaacagataggtccgcatggaatcatcaccattgatcaggct
aaaacagcgactactgaagtgagagttgttcaaggtatgcagattgatcggggatatatc
tctccttacttcgtaaccagcaccgaaaggatgacggctgaggttgagaatccatatatt
ttgatttacgacaagaaaatatcagcgcttcaaccgttacttccaatattggaaagtgca
acacagtcgggtcgtcctttgtgtattattgctgaagatgtggaaggggatgcgttggca
actcttgttgttaatagagtgcgttgcgggttgccagttcttgcagtgaaggcgcctgct
tttggtgatcgtcgtaaggaagttcttcgcgatattgccgctgtagttggggctactgtt
atttccgaagaaattggtcttaagcttgaaaaagccacgattgctgatttgggttctgct
aaaaaagttgtcatgtctaaagatgatacaacaatcgttgggggaaatggtccttcagag
agaattgaaggtcgtattaacgaaattcaaaaagctattgaagatactaagtccgattat
gatcgtgacaaactaaaagagcgcttagctaagttagcagggggtgttgctgtcttagaa
gttggagatgtaactgaggcggcgttgggcgagaaaaaagatcgttaccaagattcactt
gatgctacgcgtgctgcttctgatgaaggtattgtcccagggggcggtattgcgctcgtc
cgtgcagctcaggcattgtctgtcaaaggagataatgaggatcagtgtgctggtatagaa
attgttcgtaaggctctttcttatccatgtcgtcaaattattaaaaatgctggagatgaa
tctgagcttattgtcagcaaaatacaggaaagcaaaactgctaactacggttataatgct
caaaaaagtgttttcggtgatatgtttgaaatgggtatcattgatcctgtgaaggtagtt
cgcaatgctttacagtctgcgggttctcttgcaggtatgatgcttattactgaggctgtt
gttgttgatgcgccaaaagatgaaacagcatctcctcaaatgcctgccggtggcggtatg
ggcggtggtatgggtggtatggatatgatgatgtaa
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