Candidatus Liberibacter asiaticus Ishi-1: CGUJ_04090
Help
Entry
CGUJ_04090 CDS
T03607
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat00521
Streptomycin biosynthesis
lat00523
Polyketide sugar unit biosynthesis
lat00541
Biosynthesis of various nucleotide sugars
lat01100
Metabolic pathways
lat01110
Biosynthesis of secondary metabolites
lat01250
Biosynthesis of nucleotide sugars
Module
lat_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGUJ_04090 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGUJ_04090 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGUJ_04090 (rfbC)
Enzymes [BR:
lat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CGUJ_04090 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF4360
Motif
Other DBs
NCBI-ProteinID:
BAP26682
LinkDB
All DBs
Position
893637..894233
Genome browser
AA seq
198 aa
AA seq
DB search
MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR
PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE
MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE
YDGLPLLSLNMERDLLCV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaacattaatcccgtacgtattttaaaaacaagaaaatttgaagattctagaggatgg
ttttcccagacttatagtagtaaactattaaaagaacttggtttacaggatgtctttgtt
caggacaatcactctttttcttttgattgtggtacaataagaggattacattttcagcgt
cctccttatgctcaagcaaaacttgtgaggtgcattgctggtcgcatctttgatatcgct
gtggatatacggagaaattctccaacttatggatgttgggtttctttagaaatttcggca
aacaatggtttgcagatttatattcccaccggatttgcacatggatttatgactttagaa
atgaatacagaagtgatttataaagtcacagacttttattctgtagagcatgattctgga
gtggcttggcaagacaaaagtatagatataacatggccattattggatacaatattgcct
tctgtatctgagaaagatcaaaatcttccttttttaaatcaaatagatagtccatttgag
tatgatggcttgcctcttctttcactgaatatggagagggatttgctatgcgtctaa
DBGET
integrated database retrieval system
