Candidatus Liberibacter asiaticus Ishi-1: CGUJ_04180
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Entry
CGUJ_04180 CDS
T03607
Symbol
ropZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGUJ_04180 (ropZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lat03021
]
CGUJ_04180 (ropZ)
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_04180 (ropZ)
Enzymes [BR:
lat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGUJ_04180 (ropZ)
Transcription machinery [BR:
lat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGUJ_04180 (ropZ)
DNA repair and recombination proteins [BR:
lat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGUJ_04180 (ropZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
BAP26700
LinkDB
All DBs
Position
920116..920484
Genome browser
AA seq
122 aa
AA seq
DB search
MARTTVEDCIDKVDNRFLLVLLASHRTRHLSQGAKPTVDVGKDKNTVVALREIASGTLSP
DDLEEDFIHSLQKHVEIDEPDSPTENSDFSWHKPEALSFGQMSEGDLLEGINNIVTPDKR
DD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtactactgtagaagattgtattgataaggtagataaccgattcctgctcgtt
cttctggcgagccatcgtacaaggcatctatcccagggagcaaaaccgacagttgacgtt
gggaaggataagaatacggtcgtagcgttgcgcgagattgcaagtggtactttgtcgcca
gatgatcttgaagaggattttattcattctcttcaaaagcatgttgagattgatgaacct
gatagtcctactgagaattctgatttctcatggcacaagccggaggctttgtcatttggg
caaatgtcagaaggagatctcttagaagggatcaataatatagtcactcctgataagaga
gatgattga
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