Candidatus Liberibacter asiaticus Ishi-1: CGUJ_04195
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Entry
CGUJ_04195 CDS
T03607
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CGUJ_04195 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lat03019
]
CGUJ_04195 (rnc)
03009 Ribosome biogenesis [BR:
lat03009
]
CGUJ_04195 (rnc)
03036 Chromosome and associated proteins [BR:
lat03036
]
CGUJ_04195 (rnc)
Enzymes [BR:
lat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CGUJ_04195 (rnc)
Messenger RNA biogenesis [BR:
lat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGUJ_04195 (rnc)
Ribosome biogenesis [BR:
lat03009
]
Eukaryotic type
90S particles
RNase
CGUJ_04195 (rnc)
Prokaryotic type
rRNA processing factors
CGUJ_04195 (rnc)
Chromosome and associated proteins [BR:
lat03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CGUJ_04195 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
BAP26704
LinkDB
All DBs
Position
921943..922626
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AA seq
227 aa
AA seq
DB search
MSALRYSTLEKRIGYAFANRSLLEKALTHSSISHSYQESYERLEFLGDRILGLLISTLLF
NHFDSAKEGELSVRFNSLVSAETCSQVARELDLASFIRVSSDLRKDVCSFMTSIQADVVE
SLIAALYLDGGIEVAGTFVDKYWKQRALKSGKFRRDAKTELQEWAHAKFGVTPEYKVTFR
SGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIWT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcattgcgatattcaactctagaaaaacggataggttatgcttttgctaataga
tctttattagaaaaggcattgactcattccagtatttctcattcatatcaagaaagttat
gaacgactggaatttctgggtgatcgaattcttggtcttttgatatcgacattgttgttt
aatcattttgattctgccaaagaaggagagctttccgttcgctttaattctttagtgagt
gcagaaacttgttcccaagtagcaagagaattagatcttgcttcctttattcgtgtgagt
tctgatctcagaaaagacgtttgcagttttatgacgagtattcaagctgatgttgtagaa
agcttaattgctgctctctatcttgatggcggtattgaagttgcgggcactttcgtagat
aaatattggaaacaacgtgctcttaaaagtggaaagtttcgtcgtgatgctaaaactgaa
ttgcaagagtgggcgcatgcaaaatttggagtaaccccagaatataaagtaacttttcgt
tctggtcccgaccatgatccacgtttcacggtagtagttgagatttcgggacttgctcct
gctcaagggatggattgttcaaaaagagcggcagagcaagtagctgctgcagaagttttg
aagcgtgaggggatttggacgtga
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