Candidatus Liberibacter asiaticus Ishi-1: CGUJ_04255
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Entry
CGUJ_04255 CDS
T03607
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03420
Nucleotide excision repair
lat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGUJ_04255
03430 Mismatch repair
CGUJ_04255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_04255
Enzymes [BR:
lat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGUJ_04255
DNA repair and recombination proteins [BR:
lat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGUJ_04255
MMR (mismatch excision repair)
Other MMR factors
CGUJ_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAP26716
LinkDB
All DBs
Position
complement(939320..941377)
Genome browser
AA seq
685 aa
AA seq
DB search
MQQDDQKSHFSHILKGDFVPSCVPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVL
IARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGGKIPRIQTFHSFCASILRKH
GEVVGLPTDFAILDSAESRTIIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQ
SSLTEDAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHEKIPYIMVDE
YQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANI
IKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTII
QEIINIQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHKVIGGSFYDRQEIRDALAYF
RLVCQEHRDEDFKRIINCPKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIR
QSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLS
IIEKHETLEGFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQ
LSINEGNVEGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYDP
SHTQEIIYDDIYGTFSEHWNQIPEP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacaagacgatcaaaaaagccatttttctcacatattaaaaggcgattttgtccct
tcgtgtgttcctaactatcttaaagggctcaatgctcaacaaactcatgctgttacaatc
cccgatgatactccgctcctcatattagcaggagctggtactggcaaaacgacagtattg
atagcacgtatgttgcatttaatctgtcacaaggaaatccctccctcgaaaattcttgcc
atgacttttaccaatcaagcaattcaagaaatgaaaaatagattagcttgttatttagga
ggaaagattccaaggattcaaacttttcattctttctgtgcaagcattttacgcaaacat
ggagaagtagtcggtcttcctactgattttgccatcctcgattcagctgaaagtcgcaca
attatcaaacaattactcaaagatttacaaattgacgacaaagattatgacccccatgag
gtgatcgaaaaaatagattattggcaaaatcgcggttggaatccaaaagatattccacaa
tcctctttaactgaagatgcagagattccaaaagcaatctatattcaatatgtcgcctat
ctccagaaaacaaaaagttgtgatttcggcggattaatcataaaaaccattgaagtattg
catcatccacatgttttgaaaaagtatcatgaaaaaattccttatatcatggtggatgaa
tatcaagatatcaatacccctcaatatctattattacgattattatgtcaaaaagaagac
tccaaacaaggcgcccgtatatgttgtgttggtgacgaaaatcagtgtatttatgaatgg
cgtggtgcacaattttctcatatcctcaattttcaaaaagattttaaagatgctaatatt
atcaaacttgaacaaaattatcgttcaactactcacattctcaatacggctaacaagcta
atttcccataataaacagcgctttgataaaaaactctttacccaacgtgattgtcatgat
gatgcaaaagtcagcatacatgttagtcaaagtgataactctgaattatctacaatcatc
caagaaattataaatatccaaaatacagggatgtctttaaacaacatagccatccttgta
cgcacatcttggcaaacacgcaaatttgaagatgcatttcttgaacaagaaatcccccat
aaggtgataggaggtagtttttatgaccgtcaagaaattcgcgatgccctcgcttatttt
cgcttagtatgccaagaacatagagatgaggattttaaacgtatcatcaactgtcctaaa
agaggcataggaaaagaaagcttacacaaaattcaatatcatgcttctcaacatcacatt
tccttactacaagcaagtgaaaaattgattgatagcggtcaatttcgacctcaaatacgc
caatcattacaaaattttgtcaaagatattcgtcggtggaataattgttccaagaaaatg
gaccctgcccctattgcaaacatgattcttgaacaaagtggttacatggcaatgtggaag
aataataaatcttcggaaaaatcacaggaacgtcttgataacctacgagaacttctatcc
attatagaaaaacatgaaacattagaaggctttgttctccaggctcccctgagagagaat
cttggttcattcatacccgattctaattgcatccaaatcatgactttacatgctgccaaa
gggctagaatttgatactgtcttcatttcaggatgggagcaaggattacttcctcaccaa
ctctcaatcaacgagggtaatgtagaaggagaacgccgactcgcatacgtaggcattacc
cgtgcaaaaaaaaaatgtcatctcttctatactatcaatcgacgaacgcatgactttacc
cgcgtagaaagatatcaaccatcgcaagtatcacagtttttattagagttatacgatcct
tctcatacccaagaaatcatttatgacgatatttatggcactttttctgagcactggaat
caaatacccgaaccataa
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