Candidatus Liberibacter asiaticus Ishi-1: CGUJ_04460
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Entry
CGUJ_04460 CDS
T03607
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGUJ_04460 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_04460 (uvrB)
DNA repair and recombination proteins [BR:
lat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGUJ_04460 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGUJ_04460 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
T2SSE
AAA_7
DUF8061
AAA_16
SRP54
AAA_22
Zeta_toxin
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAP26760
LinkDB
All DBs
Position
complement(980648..983065)
Genome browser
AA seq
805 aa
AA seq
DB search
MPKKTRSFPKKDSRIQSISTRVDDPDYFSFEEKQLEVDKTMVADAMRRIRSEAGKHRKNA
AKRMLIHQRENTASKGEFQSQSSTSMSEKQTREISEQTMTPSVQALARLIQSDNPLLKNG
KIWTPHRSWSINNHSKDITFFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSG
KTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPR
TDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKIG
DSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEI
SEFYPLTGQKIRNVETIKIYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQ
RLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTI
PQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQC
QGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTE
YLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDAD
KEGFLRSKTSLIQTIGRAARNVNSKVILYADTITKSIQLAIDETTRRREKQLEHNKKHNI
NPQSVKEKIMEVIDPILLEDAATTNISIDAQQLSLSKKKGKAHLKSLRKQMHLAADNLNF
EEAARIRDEIKRLKSSPYFQGLDDS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaaaactcgctctttccctaaaaaagattctcgcatacaatcgatcagcacc
cgtgtcgatgatccggattatttttcatttgaagaaaagcaacttgaagtagataaaaca
atggttgccgatgcgatgcgtcgtatccgttctgaagcgggtaaacatcgcaaaaatgcg
gcaaaacgcatgcttatccatcagcgagaaaatacagcttcaaagggtgaatttcagtct
caaagctctacctctatgtcagagaagcagacgagagaaatttctgaacaaacgatgact
ccatcagtgcaagcacttgctcgtttaatccaatcagacaaccctcttctcaaaaacggt
aaaatttggacacctcatcgttcttggtccataaataatcattcaaaggatatcacattc
tttcaaatgcaaacagattaccatccttctggagaccaacctgctgctattgcacaactt
ttaaaaggaattcattcaagagaaaaagtacagcttttactcggagtgactggatccgga
aaaacttttactatggcgaaagtaatcgaagcaatgcagcgacctgctatcgtgatggca
cctaacaaaatcttagcggctcaattgtattcagaatttaagaatttttttccccataac
gccgttgaatatttcgtttcttactatgattattatcaaccagaagcgtatgttccccga
acagatacgtatattgagaaagaatcttctattaacgaacaaattgatcgtatgcgccac
tctgctactcgctctctcttagaacgcaatgattgcatcgtcgtctcttcagtgtcttgt
atctatggtataggatctgttgaatcatattctcaaatgattgtacaactaaaaattggt
gattcggtagaacaaaaagaattactttcttctttagtcaaacaacaatacaagcgccag
gatataggaattatacgcggaacatttcgagtttgtggcgattcaatcgagatttttcct
tctcatcttgaagatgtagcatggcgtgttagcatgtttggtaatgatatcgaagaaatt
agcgaattttatcctctaactggtcaaaagattagaaatgtcgaaacaatcaaaatatat
gctaattcccattatgttacgccacgacctacccttaataccgccatgaaatatattaaa
gaagagcttaagatgcgtcttattgaactggaaaaagaaggaagattacttgaagcacaa
cgtcttgaacaacgaatcacttacgatttagagatgttagaaactacaggatcttgtcaa
tctattgaaaactactctcgctatcttactggacgcaatccgggcgaacctcctccgacg
ctttttgaatatattcctgaagattcgttattatttgttgatgaaagtcatgtaactatt
cctcaaattagtggtatgtatcgcggtgattttcatcgtaaagcgaccttagccgaatat
ggttttcgtcttccttcttgtatggataatcgtcctttgcgttttgaagagtggaattgc
ctaaggccaaccactatcgtcgtttccgctactcctggatcatgggaattagaacaatgt
caaggcatcattgtcgaacaaattattcgtcctacaggattggttgatccccctgtagag
attcggtctgctcgcactcaggtagaagatgtttatgatgaaatcaatttagcagcccaa
caaggtttacgcattttattaacagttcttaccaaacgaatggcagaagatttaacggaa
tatctttatgaacgcaacattcgtgtccgctatatgcattctgaggtgaaaacactagaa
cgtatcgaaatcatacgcgatcttcgtcttggaaaatttgatgtccttgtcggaataaat
ttattacgtgaaggactagatatccctgaatgcggtcttgttgctattttagatgcagat
aaggaaggttttttacgctctaaaacctctttaatacaaaccattggtcgtgcggcccgt
aacgtcaatagcaaagtcattctttacgctgatacgattaccaaatctattcaattagct
attgatgagactactagaagacgagaaaagcaactcgagcataacaaaaaacataatatt
aatccccaatccgtgaaagaaaaaatcatggaagtgattgatccgattctactagaagat
gctgcaacaactaatatcagcattgacgcacaacaattatctctgtccaagaaaaaagga
aaagcacatttaaaatcgctacgaaaacaaatgcatcttgctgctgataatttaaatttt
gaagaagcagctcgtatccgcgatgaaattaaaagattaaaaagctcaccttattttcaa
ggtttagatgattcttaa
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