Candidatus Liberibacter asiaticus Ishi-1: CGUJ_04725
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Entry
CGUJ_04725 CDS
T03607
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Pathway
lat00020
Citrate cycle (TCA cycle)
lat00190
Oxidative phosphorylation
lat00650
Butanoate metabolism
lat00720
Other carbon fixation pathways
lat01100
Metabolic pathways
lat01110
Biosynthesis of secondary metabolites
lat01120
Microbial metabolism in diverse environments
lat01200
Carbon metabolism
Module
lat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lat_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CGUJ_04725 (sdhA)
00650 Butanoate metabolism
CGUJ_04725 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CGUJ_04725 (sdhA)
00720 Other carbon fixation pathways
CGUJ_04725 (sdhA)
Enzymes [BR:
lat01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CGUJ_04725 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BAP26812
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Position
1038975..1040810
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AA seq
611 aa
AA seq
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MKNSSNLKSSYTYVDHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQ
GGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQYLAMEAPQSVYELEHYGVPFSRNE
AGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIEYFALDL
IINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARA
GLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVV
SRCMMMEIREGRGVGKSKDHIHLYLNHLDPAVLQERLPGISESARIFAGVDVTRDPIPVI
PTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGANRLGSNSLIDLVV
FGRAAVIRASEMIDKSSPIPSLDISSCDRIMDRFDRLRHADGHVPTAALREKMQRAMQLD
AGVFRTQDSLSDGCRNLSCLWDEMADLKVHDRSLIWNSDLVETLELQNLMINAIATVYSA
EARKESRGSHAREDFKDGEFGGRDDVNWRKHSLCWVDWNTGKIKLDYRPVHTELLCGGVD
YSKIAPKARVY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcttctaatcttaaatcttcgtatacttatgtagatcattcttatgatgtt
gtcgttgttggcgccggaggagcgggcttgcgcgctactttaggtatggctgaaaaggga
tttaagacggcatgtattacaaaagtttttcctactcgttcgcatacggttgcagcacag
ggaggaattgcggcttcgcttgccaatatgacaccggatagttggcaatggcatctatat
gatacgataaaaggctctgattggcttggagatgtagatgcgattcagtatcttgcgatg
gaagcgccgcagtctgtttatgagttagagcactatggtgtacctttctcacgtaatgaa
gcagggaagatttatcagcgtccttttggtggacatatgcaaaactatggagaaggtcct
cctgttcaaaggacttgtgctgctgctgatagaacaggacatgctattttgcatacacta
tatggccaagcgttaaaaaataatgcggaattttttattgagtattttgcacttgatctt
atcattaactcggaaggttgctgtgttggtgttgtcgcttggcagctagaaacgggtgaa
attcatcgtttttctgctaaattagtggtgttagcgacaggtgggtatggtcgagcttac
ttttctgctacatcagcacatacttgtactggtgatggtgctggtatggttgcacgtgcg
ggtctgccattacaggatatggaatttgtacagtttcatccaactgggatttatggcgca
gggtgtcttattacggaaggggcgcgtggagaaggtggctatcttgttaactctaaggga
gaacgttttatggagcgttatgccccttcagctaaggatcttgcttctcgagacgttgtt
tctcgttgtatgatgatggaaatacgagaagggcgaggtgttggtaaaagtaaagatcat
atacatttgtatttgaatcatcttgaccctgctgttcttcaagagcgtttaccaggcatt
tctgaatctgcgcggatttttgctggtgttgatgtaacacgcgatcctattcctgttatt
cctaccgtgcattacaacatgggaggtattccgactaattattggggagaggtattagat
gccaatagtaagaatccagagcgttttgcccctggtttgatggcaattggtgaggctggc
tgtgcttcggttcatggggcgaatcgtcttggttcaaattcattgattgatttagtagtt
tttggtcgagctgctgttattcgcgcttcagaaatgattgataaatcaagtccaattcct
agcttagatatatcttcctgtgatcgtattatggatcgatttgatcgcttgagacatgcc
gatggtcatgttcctaccgctgctttacgagagaaaatgcaacgagcaatgcaattagat
gcaggtgtatttcgtactcaagattctttgtctgatggatgtcgcaacctttcttgtctt
tgggatgaaatggctgatctaaaagttcatgatcgatcgttaatctggaattcggatctt
gtggaaactcttgaattgcaaaatttgatgatcaatgcgattgctacagtttattctgca
gaagcacgcaaagaaagcaggggatctcatgcgagagaggattttaaagatggcgaattt
ggtggacgtgatgatgtcaattggcgcaaacattctctttgttgggttgattggaataca
gggaaaataaagcttgattatcgtccagtacatactgaattgctttgtggtggagtcgac
tattctaagatagctcctaaagcacgtgtttattag
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