Candidatus Liberibacter asiaticus Ishi-1: CGUJ_05385
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Entry
CGUJ_05385 CDS
T03607
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lat
Candidatus Liberibacter asiaticus Ishi-1
Brite
KEGG Orthology (KO) [BR:
lat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lat03400
]
CGUJ_05385
Enzymes [BR:
lat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CGUJ_05385
DNA repair and recombination proteins [BR:
lat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CGUJ_05385
Prokaryotic type
CGUJ_05385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAP26937
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All DBs
Position
1161568..1163019
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AA seq
483 aa
AA seq
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MKATTAMSVHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQWRQHGISARQSHF
IYASLLQVQKSLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRD
KLLEKRLQHRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPVP
AIRLTGPVTPSNIPRFFDYPFQAIDPMFPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQ
GTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYRHLMAFYPS
VCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASF
LVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDP
QGTFIRHWLPELNNVPTQYIHAPHSWLDKNDLSLNYPLPIVDHKKACHHTLNQYYAAKKQ
SLL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctactactgctatgagtgttcatctggtttggctacgcaatgatcttcgtatt
accgacaacaaagcactgtatgccgcttgtcataattcagatgcaaaagtaatagcggta
tttattgctactcccgaacaatggcgccagcatgggatatcagcacgtcagtctcatttt
atatatgctagccttctccaagttcaaaagtctctttctcaaaaaggtattgtcttccaa
taccatcaatgttctaattttgatgattcaatagaatggctagattcttattgtttgcaa
caaagggttacaaaacttttttataatcgccaatacgaaattaatgaagttcggcgcgat
aaacttctagaaaaacgcctccaacatagggttatctgcaagagttttgacgatagtgtt
ctcctgccacctgggagtatactcaaccatgcgcttcaaatgtataaggtctatactcca
tttcgtaaagcattgatacaaaacttagtacaagcagatctgcgttctttgcctgtccct
gctatacgtctcactggtcctgtaactccaagcaatattcctcgatttttcgattaccct
tttcaagcaatagatccaatgtttcctattggcgaacaaaatgcgttgcacattttacgt
aaattttgcaaagaaaaagtatattattatgttgaacaacgggatattcctgctatccaa
ggaacaagtcagctatccccctacttgtctattggtgtcctatctcctcgtcaatgttgg
aatagattaaaagaagaatttgtagatctactgatcaaacccaaaagcggcgcttttagc
tggctcaatgaactcatttggcgtgaattttatcgccatttaatggcattttatccttct
gtctgcatgggaaagcctttcattccatggactgaaaaaatagaatggaacaaggattct
cacctattacaagcatggaaacaaggatacacagggtttcctattattgatgcagcgatg
cgtcaactcaatacgattggatggatgcacaatcgcctacgcatgattacagcaagtttt
ttggtcaaagaccttttagtagattggcgaattggagaagaatattttatgtcacaatta
ctagacggtgatttagcatcgaataacggcggatggcaatgggcagcatctactggaaac
gattccgttccctactttcgcatttttaatcctaccatccaaggaaaacgttttgatccg
caaggaacttttatacgtcactggttacctgaactcaacaacgtccctacgcaatacatc
catgctccccatagttggctggataagaatgacctatctctcaattatccacttccaata
gttgatcataaaaaagcatgtcatcacacattgaatcaatattatgccgcgaaaaaacaa
tctctattatga
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