Candidatus Liberibacter africanus: G293_00775
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Entry
G293_00775 CDS
T03953
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lau
Candidatus Liberibacter africanus
Pathway
lau03030
DNA replication
lau03430
Mismatch repair
lau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G293_00775 (dnaE)
03430 Mismatch repair
G293_00775 (dnaE)
03440 Homologous recombination
G293_00775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lau03032
]
G293_00775 (dnaE)
03400 DNA repair and recombination proteins [BR:
lau03400
]
G293_00775 (dnaE)
Enzymes [BR:
lau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G293_00775 (dnaE)
DNA replication proteins [BR:
lau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G293_00775 (dnaE)
DNA repair and recombination proteins [BR:
lau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G293_00775 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
HHH_3
HHH
Motif
Other DBs
NCBI-ProteinID:
AKK19799
UniProt:
A0A0G3I1Q8
LinkDB
All DBs
Position
complement(168933..172610)
Genome browser
AA seq
1225 aa
AA seq
DB search
MVFISGSSQKKKLPMPRTIEQSPGFIHLHVHSSYSLLEGALSLNNILDKTVADQQPAIAI
TDTNNLFGALEFSQKACSAGIQPIIGCQLDIDMQDALTMTNRGKTSFSTVPSIVLLVATA
EGYQRLIELVSRMYLMDQGKESVRICLSWLKEIGTEGLIMLTGGKLSPIDQAFLFNNPQV
AEERILTFKKIFDNRLYVNLQRHKGYDHCLENQVVQLAYAHDLPLVATNNCLFLSEEDYE
AHDVLIAVAHSTVVSQEDRPRVTSDHYLKSRSEMISIFSDLPEALDNTVEIARRCSFILQ
VHKPILPRFIEQDCDDVEKLEEIDLRNKAMAGLEIRLSQGIAKGYSEQDYRKRLEFELDI
IARMKFSGYFLIVADFIQWSKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERF
LNPDRMSMPDFDIDFCQDRRDEVIRYVQDKYGHERVAQIITFGSLQAKAALRDVGRALQM
PYSQVDRLCKLIPNNPAHPISLKEAIKDYSRFREAILDDPFVNRLLEISLKLEGLYRHAS
THAAGIVIGDRPLSKLIPMYRDVRSDIPVTQFNMKWVEKAGLVKFDFLGLKTLTLLQKSL
DLLSQRGIDVDFSLIPFDDRETYNLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIAL
VSLYRPGPIDNIAVYNNRKNRKEKIVSIHPLIDPILKETQGVIIYQEQVMQIAQLLSGYS
LSEADVLRRAMGKKIKEEMDQQKERFVSGASKNGISRTMAVNIFELLAKFADYGFNKSHA
AAYAVISYRTAWMKAHYPVEFLAASMTLDMDNVERIKKFCQDARQFNIQIIPPSVRTSCV
NFEVGENCIYYSLAAIKGVGTTTAHHIMEARADKPFDSLEDFCSRVDSKQLNRRVLESLV
FSGALDFFGYSRAQLLQSIDNIQKYAQWIEKNRTNEQENIFSCEKGKLSDKITLEEFSVE
NSSARFENERQVLGFYFSGHPLDVYKPILQKIGIKGYEESIATISGSNIQLAAMVMAKHQ
KKTRKGSRIGWVTFSEPGKEYEAVFFPKNNRRDKRKSLGANEDFLCLEDCYDHSTEMILQ
DAEEDPNRLTLQEKQKLEKEKPFLLIEKKPYIIFIPQEENLSLKRDSVRLLWVKSLEKES
MRMLDSVKIYLRDNSPLKEIHKYFQNRQAKSSDKKGKISLIFVKSQETTEIEITLDQYPI
SSEIAFDLQHIVGVTKIVQIIKNNT
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggtttttattagtggatcttcacaaaaaaagaaattacccatgccgagaaccatagag
cagtcacctggttttatacatttacacgtacattcgtcgtattccttgttggaaggagct
ctttcgttaaataatattttggataagacagttgcggatcaacagcctgctattgctatt
actgatacgaataatctttttggtgcattagaattttcgcaaaaagcttgttcagctggt
attcagcctattatcggctgtcaattagatattgatatgcaagatgccttaacaatgact
aatagggggaaaacatctttctcaactgttccttctattgttcttttagtggctactgct
gaaggatatcaaagattaattgagcttgttagtcgcatgtaccttatggatcaaggcaaa
gaatccgttcgtatttgtttatcttggttgaaagaaataggtacagaaggcttgattatg
ttaacaggagggaaacttagcccgatagatcaagcttttttattcaataatcctcaagta
gcagaagaacgaattttaacctttaaaaagatttttgataaccgtctctatgtcaattta
cagcggcataaaggatacgatcattgtcttgagaatcaagtggttcaattggcatatgca
catgatttgccattagttgcaaccaataattgcttgtttttatccgaagaagattatgaa
gctcatgatgtattgatagcagttgcacattcaaccgttgtatcgcaagaagatcgtcca
cgagttacctctgatcactatttaaaaagtcgttctgagatgatttccatattttctgac
ttgccagaagcccttgataacacagtagaaattgctcgaagatgttcttttatacttcaa
gtacataagccaattttgccacgttttattgaacaagattgtgatgatgttgaaaaatta
gaagaaattgacttgcggaataaagcaatggcaggattggaaatacgtctttctcaaggt
atagcaaaaggatatagtgaacaagattatagaaaacgtcttgagtttgagttggatatt
atcgcgcgtatgaagttttcaggatatttcttaatcgtagctgactttatacaatggtct
aaaaaaaacaatattccagtaggtcccggacgtggttcaggggcaggttctgtcacagct
tatgctttaacaattaccgatattgatcctttgcgtttttctcttctttttgagagattt
ttaaatccagatcggatgtctatgccggattttgatattgatttttgtcaagatcgacgt
gatgaagttattcgatatgtgcaagataaatatgggcatgaacgagtagctcaaattatt
acttttgggtctttgcaagctaaagcagcattacgagatgtaggtcgggctttacaaatg
ccatattctcaagttgatcgtctttgtaagttaatacccaataatccagcccatcctatt
tctcttaaagaagctattaaggattactctcgctttcgcgaagcaattttagacgatcct
tttgtcaatcgtcttcttgaaatttctctaaaattagaaggattatatcgacatgcttct
actcatgcagcgggtattgtgattggtgatcgtccattgtcaaaattaatacctatgtat
cgcgatgtacgatctgatattccggtaacacaattcaatatgaaatgggttgaaaaagca
ggtctcgttaagtttgattttttaggtcttaagacgttgacgttattgcaaaaaagcctt
gatttattatctcaacgaggaatagatgttgatttttcgctcattccctttgatgatcgt
gaaacatataatcttttaacgacaaaaggtacattaggcatattccagttggaaagttct
gggatgcgtcaagctctagaaggtatgcaaccggattgtattgaagatattatcgctctc
gtctcgttgtatcgtcctggtccaattgataatatcgctgtttataataatagaaaaaat
agaaaagaaaaaatagtttcgattcatccattaattgatcctattctcaaggaaacacaa
ggagttattatctatcaagaacaagttatgcaaatagcacaactactttctggatattct
cttagtgaagcagatgttttgcgacgtgcgatggggaaaaaaattaaagaggaaatggat
cagcaaaaagagcgttttgtttctggagcaagtaaaaatggcatcagcagaacgatggct
gtgaatatttttgaattgttagcaaaatttgcagactatggttttaataaatcgcatgca
gctgcttatgctgttatttcgtatcgaactgcctggatgaaagcacattatcctgttgaa
tttttagctgcttccatgactttggatatggataatgtagaaagaattaagaaattttgt
caggatgcgcgtcaatttaatattcaaattatacccccatctgttaggacgtcatgtgtg
aattttgaagtaggggaaaattgtatttattattctttagctgcgatcaaaggcgtagga
acaacaacggcacatcatatcatggaagcacgtgcagataaaccgtttgatagtttagaa
gatttttgttctagggttgattcaaaacaattaaatcgtcgagtattagagagtttagtc
ttttcaggagctttggatttttttggatatagtcgtgcgcaactgttgcaatctattgat
aatattcaaaagtatgcacagtggattgaaaaaaatcgtacgaatgaacaagaaaatatt
ttttcttgtgagaaaggaaagttgtctgataaaattactttggaagaattttcagttgag
aattcttctgcgagatttgaaaatgaacgacaggtattaggtttttatttctcaggacat
cctcttgatgtgtataaaccaatactgcaaaaaatcggtattaagggatatgaagaaagc
attgctacgatcagtggaagtaatatccaattagcagctatggtgatggctaaacatcaa
aagaaaacacgaaaaggatctagaatagggtgggtaactttttctgaaccagggaaggaa
tatgaagcagtttttttcccgaaaaataatcgaagagataaaagaaagtcattaggtgca
aatgaggattttttatgtcttgaggattgttatgatcattcgacggaaatgatattacaa
gacgcagaagaagatcctaatcgtttgacattacaagaaaaacagaaattagaaaaagaa
aaaccctttttattaatagaaaaaaagccttatatcattttcattcctcaggaagaaaat
ctttctcttaaaagagattcggttcggttgttatgggtaaaatctttggagaaggaatcc
atgagaatgttggattctgtaaaaatatatcttagggataatagtcctcttaaagaaatt
cataaatatttccaaaatcgtcaagctaaaagtagtgataaaaaaggcaagataagttta
attttcgttaaatcacaagaaacaactgagatagaaataacgcttgatcaataccccata
tcatctgaaattgcttttgatcttcaacatattgtaggcgtaacaaagattgtccaaata
ataaaaaataatacatga
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