Candidatus Liberibacter africanus: G293_02585
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Entry
G293_02585 CDS
T03953
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lau
Candidatus Liberibacter africanus
Pathway
lau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G293_02585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lau03021
]
G293_02585
03019 Messenger RNA biogenesis [BR:
lau03019
]
G293_02585
Transcription machinery [BR:
lau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G293_02585
Messenger RNA biogenesis [BR:
lau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G293_02585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
S1CSD-TOTE-2
AAA_25
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKK20149
UniProt:
A0A0G3I2N2
LinkDB
All DBs
Position
complement(546757..548019)
Genome browser
AA seq
420 aa
AA seq
DB search
MKLQELKNKSPTKLLSFAESLDIENANVMRKQELMFSILKVLSSRDVEIIGAGVIEVLQD
GFGFLRSPDANYLAGPDDIYVSPSQIRSFSLKTGDTVEGPIRAPKEGERYFALLKVNSIN
FDVIERVRNKIHFDNLTPLYPDKRFNMELNDPDNKDISSRIIDLISPIGKGQRSLIVAPP
RTGKTILLQSIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDEPASRHV
QVAEMVIAKAKCLVEYGLDVVILLDSITRLSRAYNVLMPSSGKILTGGVDANALQRPKRF
FGAARNIKEGGSLTIIATALLDTGSRMDEVIFEEFKGTGNCEIVLDRKIADKRIFPAMDI
IKSGTRKEDLLIEKQDLQKVFMLRRIVSSMNSSDAIEFLIDKIKQTKDNKEFFYSMNKQN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcaagagcttaaaaacaaatctccaactaaacttctttcttttgctgaatcg
cttgatatagaaaacgctaatgttatgcgtaagcaagaactgatgttttctatattaaaa
gttttatctagtagagatgtagaaattataggagcaggtgttattgaagttcttcaggat
ggttttggttttttacgttctcctgacgctaactatttagccggtccagatgatatttat
gtttctccttctcaaattagaagtttttctttaaaaacaggagatacagttgaaggacca
attcgtgcacctaaagaaggtgaaaggtattttgctcttttgaaagtaaattctatcaat
tttgatgttattgaaagagtgagaaataaaatacattttgataatttaactccactttat
ccagataaaagatttaatatggagttaaatgatccggataacaaagacatatcttctcgt
attattgatttaatatctcctattggaaaaggacaaagaagtttaatagttgcccctcca
cgtacgggtaagactattcttttgcaaagtattgctcattcaattaaaaaaaatcatcca
gaatgttacttaatcgtattacttattgatgaaagaccagaagaagtaactgatatgcaa
agatctgtgcaaggagaagttatatcttcaacatttgatgaacctgcatctcgtcatgta
caagttgctgaaatggttattgcaaaagctaagtgtcttgtggaatatgggcttgatgtt
gtcatactgttagattcaataactaggttatctcgtgcttataatgttttaatgccatct
tctggaaagattttaactggaggagtagatgcaaacgcactccagcgtccaaaaaggttt
tttggtgcagcgagaaatataaaagaaggaggatctcttactattattgctacagcattg
ttagacactggaagccgtatggatgaagttattttcgaggaatttaaaggtactggtaac
tgtgaaatagttttagatagaaagatagcggataagcgtattttccccgctatggatatt
attaaatctggaactcgtaaagaagatcttttaatagaaaaacaagatcttcaaaaagtt
tttatgttacgtcgaattgtttcttctatgaatagctctgatgctatagaatttttgatt
gataagataaaacaaacaaaggataataaagaattcttttattcaatgaataaacaaaat
tga
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