Candidatus Liberibacter africanus: G293_03270
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Entry
G293_03270 CDS
T03953
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lau
Candidatus Liberibacter africanus
Pathway
lau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G293_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lau03400
]
G293_03270
Enzymes [BR:
lau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G293_03270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G293_03270
DNA repair and recombination proteins [BR:
lau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G293_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
MspA
Motif
Other DBs
NCBI-ProteinID:
AKK20282
UniProt:
A0A0G3I934
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All DBs
Position
complement(716619..717500)
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AA seq
293 aa
AA seq
DB search
MPELPEVEIIRRNLTPIMNNMILTNVCLHRKNLRFDFPPNFSSTVLGKKIINISRRAKYL
LFELEDNLSIIVHLGMTGSFTIERSESISSCTKPTKDPRHNHVTIDLTDDTKTKKYRIIY
NDPRRFGFMDLVETSLKHQHPYLRELGPEPTDKKFNASYLAYHFHKRNNNLKNALLNQKI
VAGLGNIYVCEALWRAKLSPIRSTKSLVQKHEDSKDLISILIQEIKTVLIDAINAGGSSL
RDYVHVDGSTGSFQNALSVYGKAGEPCLSNCGQTINRIVQAGRSTFYCTYCQK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtagaaatcattcgacgcaaccttacaccgatcatgaacaac
atgatattaacgaacgtatgtttacatcgaaaaaatctacgctttgattttccccctaat
ttttcttcgaccgtactaggaaaaaaaatcatcaacatttcccgacgtgcaaaatatttg
ctctttgagcttgaagacaatctatcaataattgtacatctaggaatgacaggatctttt
accattgaacgctctgagtcaataagctcttgtacaaaaccaaccaaagatcctcgacat
aatcatgttactattgatctcacagacgatacgaaaacaaaaaaatatcgtatcatttat
aacgatcctcgtcgttttggatttatggatctagtagaaacgagtctcaaacaccaacat
ccttatttaagagaactcggtccagagccaacagataaaaaattcaatgcttcatattta
gcctatcattttcataaaagaaataacaatctcaaaaatgctctccttaaccaaaaaata
gtcgctggactggggaatatttatgtatgcgaagcattatggcgcgctaaactctctcct
atacgaagtaccaaaagccttgtacaaaaacatgaggattccaaagatctaatttctata
ctaattcaagaaattaaaacagttcttattgatgctatcaatgctggaggctcttctcta
cgtgactatgtacacgtagacggttcaacaggttctttccaaaatgcattatccgtatac
ggcaaagctggggaaccctgtctatcaaactgcggacagacaataaatcgcatcgtccaa
gcaggaagatccactttctactgtacatattgtcaaaaatga
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