Candidatus Liberibacter africanus: G293_04150
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Entry
G293_04150 CDS
T03953
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lau
Candidatus Liberibacter africanus
Pathway
lau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G293_04150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lau03021
]
G293_04150
03400 DNA repair and recombination proteins [BR:
lau03400
]
G293_04150
Enzymes [BR:
lau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G293_04150
Transcription machinery [BR:
lau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G293_04150
DNA repair and recombination proteins [BR:
lau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G293_04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AKK20454
UniProt:
A0A0G3I3M7
LinkDB
All DBs
Position
912823..916962
Genome browser
AA seq
1379 aa
AA seq
DB search
MAKGIVFNGLGRARKFFGKNPEIIDIPDLIEVQKASYDQFLMMNTAPEDRPNEGLQAAFK
SVFPIKAFSGAAMLEFVSYEFDPPKFDVDDCLRRDLTYAVPLKIILRLIVFDVDEFTGAK
SIKDIKEQSIYMGDVPLMTKDGTFVINGTQRIVVSQLHRSPGIHFDHDKGKASLSGKLLY
ACRIIPDQGLWMDIEFDSKDIIHIRIDRRRKIPVTSFLMALGMDSEEILSTFYSKIVYSK
RNDFWCFPFDSTHLMLNSKVSYDLFDVDTGEKIIESGKKVTASLLKNLEEKGVKFLGITS
DCLNGLYVAEDVVNGETGEIYSEVGDAINEESLESILNCGIEDISILHVDYSSNNTYVRS
TLVADKNKDRRDALLDIYRVMRPGDVSTLAAAESMFNFLFFNPDKYDLSTVGRVKMNMRL
NLDTPDDVRYIRKEDVIAIIKILVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQYRLGLL
RMERSIKERISAVDIDSVMPQDLINAKPVVSAVREFFCSSQLSQLEEHVNSLSRITHTRR
LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET
PYRKVCNGKVTDEVVYLSAMEEENRYISQASASLDENGAFTEDLVFCRCAGEEILVPKEK
IDFIDASPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA
KSSGAAIVAKRAGIVEQVDAIRIVIRVVEDDLDPSASGVDIYRLMKFQRSNQNTCVNQRP
LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFVPWHGYNFEDSMLISERMVSEDVFT
SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECGIICVGAEVNPGDILVGKITP
KGESPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVEVRIFNRHGVDKNERSISVE
REQIDLLIRDKDDEQAILDRNVYSRLKEILCGQTAISGPKDFKKLSVLSSDLISRYQRSQ
WWQFAVQDEKVQRNVESLKTQYETSKSILENRFKNKIDKIQWGDDMPPGVLRVIKVFVAM
KRPIQSGDKMAGRHGNKGIVSRILPCEDMPFLEDGTSVDIVLNPLGVPSRMNVGQIFETH
LGWASVGLGKKIKSSINDYKANGDIGPLRSFLEKIIGNGPHAEKISEYDDDSVLRLAEQW
KSGVPVSTPVFDGADEDAINSMLRMADLDESGQSILYDGITGEPFDRPVTVGYIYMLKLN
HMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVRCTQAYGAAYVLQEMLTIKSD
DVVGRTKVYESIVAGNNTFETGIPESFNVLIKEMQALGLSIDLENSHTKNSAKAKKFLI
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggcattgtgttcaatggtctcgggcgtgcgcgcaaattttttggaaaaaat
cctgagataattgacatacctgatctcattgaagttcagaaagcgtcttatgatcagttt
ttaatgatgaacactgctcccgaagatcgtcctaatgagggtttgcaggctgcttttaag
tctgttttcccaatcaaggctttttctggggctgcgatgcttgaatttgtgtcttatgaa
tttgatcctccaaagtttgatgtggatgattgtttgcgacgtgatttgacgtatgctgtt
ccgttaaaaattattttacgcttgattgtttttgatgtagatgagtttactggagctaaa
tctatcaaagatataaaagagcagagtatttatatgggcgatgttcctcttatgactaaa
gatggaacttttgttattaatggtactcagcgtatagttgtttctcaactgcatcgttct
cctggtatacatttcgatcatgataagggaaaagcgagcttatcgggtaagctgttatat
gcttgtcgtattattcctgatcaaggtctatggatggatatagagtttgattctaaggat
attattcatatacgcatagatagacgtcgtaaaattcccgttacgtcttttttaatggct
ttaggtatggattctgaagagattctctctaccttttattctaagattgtttattctaaa
agaaatgatttttggtgttttccgtttgattctactcatttgatgcttaattcaaaggtt
tcttatgatctttttgatgttgatactggtgagaagattatcgaaagtgggaaaaaagtt
actgcgagtttgttgaaaaacttagaagaaaagggtgttaagtttttagggattacgtcg
gactgtttaaatggtttgtatgtagcagaagacgttgttaatggagaaactggcgagata
tatagtgaagtcggtgatgcgatcaatgaagaaagtttagaatcaattttaaattgtggt
attgaagatatatccattcttcacgttgattattctagtaataatacttatgtgcgtagc
acattggtagcggataagaataaagatcgtagagacgcccttttagacatttatcgtgtt
atgcgcccaggagatgtttctactcttgctgctgcagaatcaatgtttaattttcttttt
tttaatcctgataagtacgatctttcaactgttggtcgtgttaagatgaatatgcgtttg
aatcttgatactcctgatgacgtgcgctatatcagaaaagaagatgttatcgccattatc
aagatactggttgatttgcgtaacggcaagggaacgattgatgatatcgataatttagga
aatcggcgagttcgttctgtcggtgagatgttaaaaaatcaatatcgtctggggttattg
cggatggagcgttccattaaggagcgtatttcggcagttgatattgattctgttatgcct
caagatcttattaatgctaaacctgtggtttctgctgttcgtgaattcttttgttcttca
cagctttctcagcttgaagagcatgtgaattctctttcgcgtattacgcacacgcgtcgt
ttatctgctttaggtcaaggaggtgtagcaagagctagagcaggggtagaaatgcgagat
gtgcatccaacgcattatggtcgtatttgtcctgcagaaacgtcagaaggtcataatatt
ggtttggtgagctctcttacatcttttgcgcgtgttaatgcatatggttttattgaaact
ccgtaccgcaaagtttgtaatggtaaggttacggatgaagtcgtatacctttccgctatg
gaagaagaaaatcgttatatttcgcaggccagtgcatctcttgatgagaatggtgctttt
acagaagatttagttttttgtcgctgtgcaggggaagaaattcttgttcctaaagaaaaa
atagactttatagatgcttctcctaagcaggtggtttcaatagcagcttcacttattcca
tttttagaaaatgatgattccaatcgtgttttgatgggctgtaatatgcaacgtcaggcg
gttcctttgttaaaagcggaggctccttttgttggtactggtatggagtcggttgtcgct
aaaagttccggagcggctattgttgcaaaacgtgctggaatcgtagaacaggttgatgcg
atacgtatagtaattcgtgtggtagaagacgatcttgatccttctgcttctggggttgat
atttatcgattgatgaaatttcaacgttctaatcaaaatacttgtgttaatcagcgtcca
ctagtgaaagttggagatgaggttcgcagaaatgacattatagcagatggtccatctaca
gatttaggggatctggcgcttggtcgtaatatgcttgtcgcttttgttccttggcacggg
tataattttgaagattctatgttaatatctgaacgtatggtttctgaagatgtctttact
tctattcatatagaagaatttgaagttatggcacgtgatactaaactaggaccagaagaa
attactcgtgatatacctaatgtatcagaagaaggattaaaaaatattgatgaatgtgga
atcatttgtgttggggcagaggttaatcctggtgatatcttagtaggaaagataactcct
aaaggtgaaagtccgatgactcctgaagaaaagcttttgcgagctatttttggcgaaaaa
gctgtagatgtacgtgatacatctttgcgtgttccttctggggtgtctggtacggttgtt
gaagttcgtatttttaatcgtcatggtgttgataagaatgaacgttctatatctgttgag
cgagaacagattgatcttcttattcgagataaggatgatgagcaggcaattttagatcgc
aatgtttatagtcgtctgaaagaaattttatgtggtcaaacggcgatttctggacctaaa
gattttaaaaagttatctgttctttcaagtgatttaatctcaaggtatcagcgttctcaa
tggtggcagtttgcggttcaagatgaaaaagtacagcgaaatgtcgaatctttaaaaact
caatacgaaacttctaaatctatccttgaaaatcgttttaagaataaaattgataaaatc
caatggggcgatgatatgcctcctggcgttttaagggtgattaaagtgtttgttgcgatg
aagcgtccaattcagtcaggggataaaatggctgggcgtcatggtaataaaggaattgtt
tctcgcatattgccttgtgaggatatgccgtttctcgaggatggtacttctgttgatatt
gtacttaatccattaggtgttccttctcgtatgaatgttgggcagattttcgaaactcat
cttggatgggcttctgttggtcttgggaaaaagatcaaaagtagtatcaatgattataaa
gctaatggtgatatagggccattgcggagttttctagagaagataataggaaatggtcct
catgctgaaaagatatcagaatacgatgatgattctgtattgcgtttagcagaacaatgg
aaatcaggtgttcctgtttcaacgcccgtatttgatggggctgatgaagatgctataaat
tcgatgcttcgtatggctgacttagatgaaagtggacagtctattttatatgatggtatt
actggtgagccatttgatcgacctgtgaccgttgggtatatttatatgttgaagcttaat
catatggtttcagataaagtttatgctcgttctactggaagttattcacttgttacacag
cagcctttaggtggaaaatctaacagaggtggtcagcgtttaggagagatggaagtgaga
tgtacgcaggcttatggtgctgcttatgttttgcaagaaatgctgacaatcaagtctgac
gatgttgtgggtcgtactaaagtttatgaatctattgtcgcaggaaacaatacttttgaa
acaggtataccggagagtttcaatgttttaattaaagaaatgcaagctttaggtttgagt
attgatttagaaaattcgcacacaaaaaacagcgcaaaagcaaaaaaatttctgatttaa
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