Lysobacter auxotrophicus: LA521A_00540
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Entry
LA521A_00540 CDS
T09075
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA521A_00540 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_00540 (recC)
Enzymes [BR:
laux01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LA521A_00540 (recC)
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA521A_00540 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BDU14853
LinkDB
All DBs
Position
55306..58623
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AA seq
1105 aa
AA seq
DB search
MPGRSDFRLYHSNALDVLGELLATQLREPVPGRPLLTPDVLLIPQVAMRRWLQSTLAQRH
GIAANLRFLTPGEFVRETLDANVPGASEDLDAAALQWRLYAQLTDPAALAGRAFAPLRAY
LSGDDALKPWALAGELASIFEKYQAWRRDWLLAWEAGDAPNDAQAELWRRVAGGRRHRAR
RIDDYLSRFAAPDAPLPSGMPARLFAFATLNISPDVLRVIATQARVGTLHFHVPTPSRRY
WGDLPTYAERLQRDPAEHEDENPLLSNWGAAGRDFMAVLGGYEVVHPSVEEERYADPEAL
PDDAPDRDSLLGRLQRDLLHRRAPRPWRKQVDRDDPSLQVHACHTRLREVQVLHDRLRAL
LDDPRFDPPLQAREIAVLAPDIDPYRPHIEAVFGGLAGTRDYIPYALADLSPLAGEPLAD
VFLRLLALPDARFGLSEVLDLIATPALMDAAGLDAAGLERLRLWLHEAGARWGLDPDHRA
RHDAPADDAYTWRFALDRLLLGHATNDDADLAGVAPWTELEGSALDALDVLIRVLRVLAR
NERVLGRSMTPAQWRDALFALLDALLPEHPRAVADQRAIERLRRHVDAFAKSAHDAGFDE
AVPPDVARAYFRTALSESDTRAPLLTGGVSFARMVPMRLIPFRAICLLGMNDGDYPRRDP
AGGLNKMAQELTTPARRHGDRSLREDDRFLFLQLFASAGEVFYVSWLGADPRDGSAREPS
VLVSELLDAAAHYHFDEDARDALVLHHPLQPFSPRAFGQRDEPRHFSYLAPWHPAADAVR
GPRIDAAPWFADALPAVGMPAELPLVALRRFLVDPAGQFLRQRMGLRLPDEIDAYDDLDP
LTAPARGLDRWKLQNVVFEACVEGDTDELAARLRARALLPSGPLGERQLVGLKAQVQPFA
TALREWREGDADTRAFELDVDGTRLYGHLDRLYPRGALRMRLDALHGPAQIAHGLDWLIL
SALGDTRPLAQLALWDDGPGVRERPALSVVQARAALRELLALYREGLREPLPIQARSAYR
WYAAPRADEAAELSAWKLAREQWAGSNNTWGDANNAAVQLALRGHDPFAGEFDDPDGVRF
RELATRLFDAVVHGHDIDARTGAAA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccgctccgacttccgcctctaccattccaacgcgctggacgtgctgggcgaa
ctgctcgccacgcagctgcgcgaacccgtgcccggccggccgctgctgacgcccgacgtg
ctgctgatcccgcaggtggcgatgcgccgctggctgcagtccacgctcgcgcagcgccac
gggatagccgcgaacctgcggttcctgacgcccggcgagttcgtccgcgagacgctcgat
gccaacgtgccgggcgccagcgaggacctcgacgccgccgcgctgcagtggcgtctgtac
gcgcagctgaccgatcctgccgccctcgcgggccgcgccttcgcgccgctgcgcgcgtac
ctgtcgggcgacgacgcgctcaagccgtgggcgctggcgggcgaactcgcatcgatcttc
gagaaataccaggcgtggcggcgcgactggctgctggcctgggaagccggcgacgcgccg
aacgacgcgcaggccgaactgtggcgccgtgtcgcgggcgggcgtcgccatcgcgcgcgc
cgcatcgacgactacctctcgcgcttcgccgcgcccgacgccccgctgccgtccggcatg
cccgcgcggctgttcgccttcgccacgctcaacatctcgcccgacgtgctgcgcgtgatc
gccacgcaggcgagggtggggacgctgcatttccacgtgcccacgccgtcgcgccgctac
tggggcgacctgccgacctacgccgaacgcctgcagcgcgatcccgccgagcacgaggac
gaaaacccgctgctgtcgaactggggcgcggccggacgcgatttcatggcggtgctcggc
ggctacgaggtcgtgcacccgtcggtggaggaggagcgctacgccgatcccgaagcgctg
cccgacgacgcgcccgatcgcgacagcctgctcggccgcctgcaacgcgacctgttgcac
cgtcgcgcaccgcgaccgtggcgaaaacaggtcgatcgcgacgatcccagcctccaggtc
cacgcctgccacacgcgcctgcgcgaagtgcaggtgctgcacgaccgcctgcgcgcgctg
ctcgacgacccacgcttcgacccgccgttgcaggcgcgcgagatcgccgtgctcgcgccc
gacatcgatccgtatcgaccgcacatcgaagccgtcttcggcggactggccggcacgcgc
gactacatcccgtacgcactcgccgacctgagcccgctcgccggcgaaccgctggccgat
gttttcctgcgcctgctggcgctgccggacgcgcgcttcggcctgagcgaggtgctggac
ctgatcgccacgcccgcgctgatggacgccgccggcctcgacgccgccggcctggagcgc
ctgcgcctgtggctgcacgaagccggcgcgcgctggggcctggaccccgaccatcgcgcg
cgccacgacgcaccggccgacgatgcgtacacgtggcggttcgcgctcgaccgcctgctg
ctcgggcatgcgaccaacgacgacgccgatctcgcgggcgtcgcgccgtggaccgaactg
gaaggcagcgcgctcgacgcgctcgacgtgctgatccgcgtgctgcgcgtgctcgcgcgc
aacgagcgcgtgctcggccgttcgatgacgccggcgcagtggcgcgacgcgctgttcgcg
ttgctcgacgcgctgctgccggagcacccgcgcgcggtcgccgaccagcgcgcgatcgaa
cgcctgcgccgccacgtcgacgccttcgcgaagagcgcgcacgacgccggcttcgacgag
gccgtaccgccggacgtcgcccgcgcctacttccgcaccgcgttgtcggaatccgacacg
cgcgcgccgctgctcaccggcggcgtcagcttcgcgcgcatggtgccgatgcgcctgatc
ccgttccgcgcgatctgcctgctcggcatgaacgacggcgactacccgcgtcgcgatccc
gccggcggcctcaacaagatggcgcaggagctgaccacgcccgcgcgtcgccacggcgac
cgctcgctgcgcgaggacgaccgcttcctgttcctgcagctgttcgcgtcggcgggcgag
gtgttctacgtcagctggctcggcgccgatccgcgcgacggcagcgcgcgcgaaccgtcg
gtgctcgtgtccgaactgctcgatgccgccgcgcattaccacttcgacgaagacgcgcgc
gacgcgctcgtcctgcatcacccgttgcagccgttctcgccgcgcgcgttcgggcagcgc
gacgagccgcgtcatttcagctatctggcgccgtggcatccggcggccgacgccgtgcgc
gggccacgcatcgacgccgcgccgtggttcgccgacgcgctccccgccgtcggcatgccg
gccgaactgccgctggtcgcgctgcgccgtttcctggtcgacccggcggggcagttcctg
cgacagcgcatgggcctgcgcctgccggacgaaatcgacgcctacgacgacctcgatccg
ctcaccgcgcccgcgcgtgggctcgatcgctggaagctgcagaacgtcgttttcgaagcg
tgcgtggaaggcgacacggacgagctggccgcacgcctgcgcgcccgcgcgttgttgccc
tccggcccgctcggcgagcgccagctcgtgggtctgaaagcccaggtgcagccgttcgcc
accgcgctgcgcgagtggcgcgagggcgatgcggacacgcgtgcgttcgaactcgacgtg
gacggcacgcggctctacggccacctcgaccgcctctatccgcgcggcgcgctgcgcatg
cggctggatgcgctgcacggcccggcgcagatcgcgcacggcctcgactggctcatcctc
tccgccctgggcgacacgcgcccgcttgcgcagctcgcgctatgggacgacggccccggc
gtgcgcgaacggcccgcgctgtccgtcgtgcaggcgcgcgccgccttgcgcgaactgctc
gcgctgtaccgcgagggcctgcgcgaaccgctgccgatccaggcgcgatccgcatatcgc
tggtatgccgcgccgcgtgccgacgaggccgccgagctgtcggcatggaagctcgcgcgc
gaacaatgggccggcagcaacaacacctggggcgatgcgaacaacgccgccgtgcaactg
gcgctgcgcgggcacgacccgttcgcgggcgagttcgacgaccccgacggcgtgcgcttc
cgcgagctcgccacgcgcctgttcgacgcggttgtgcacggccacgacatcgacgcgcgc
actggagcggccgcatga
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