Lysobacter auxotrophicus: LA521A_00550
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Entry
LA521A_00550 CDS
T09075
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA521A_00550 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_00550 (recB)
Enzymes [BR:
laux01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LA521A_00550 (recB)
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA521A_00550 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_22
AAA_11
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BDU14854
UniProt:
A0ABN6UEP0
LinkDB
All DBs
Position
58620..62228
Genome browser
AA seq
1202 aa
AA seq
DB search
MSAVHDAFLDLPLDGVRLIEASAGTGKTFTLATLVTRLVIERGLRVGQILAVTYTEAATQ
ELRERLRLRLELAARLANEVALMPTTLDDDSEAAVTRTLIERQARREDPLALARRLRQAA
REMDLAAVFTIHGFCARALAEHAVEAGQPLLAPELTGSERELIDAVATDLWRSLGSDAAD
AELLQQQWRTPDGLAGDLYKLLYVPRLQPAPPPASPDPLRQLLDAAAALRDAFAAHGEDA
CAALHAAIENKVLNGTSYKSALIDDLRNALSQWCGNGDASAPVHEKLDRLTPRMLADKTN
KPKKGAPLQAPVSPLFDAVARYLDAANARETWLASRRIALVHRVRDAAAKRLAAIKRLRR
EQTFDDLIANLADALDGPYGARLIERLRAQYAFALVDEFQDTDPRQWSIFERIFGSGDEP
ALFLIGDPKQAIYRFRGGDVHTYLAAAERAQRAPALDRNFRSRPSVLQAIAALYERAGEA
AFVDERIRFRDVEPGGAVQDGDFRRDGNTAPALDLCVLPPPDDGRRNSKWYVGEARQLAA
LACVTAIHGLLSDAREGRAVLRERGAERTPQSGDIAVLVRNHGEATLMREALSRAGIPAV
AAGRRSLFSTEQARDVLALLEALLRPDDDARLRGALATMLVGLDADTLARFDEDAQLHRH
WQLRALAWRDRWQRHGPLAMLGDVAAEHAPRLLAQSDGERRLTNTLQLAEVLQEADIEAI
GEHGLVDWLRTRIAEADDSDETQQLRLESDARCVQILTLHKSKGLEYPFVFLPFAAIGRD
ARNGNLCEFHDGEGRVLQLRSEATPENASAWNDARIRHENEERGEDARLLYVGLTRARHA
LWLATGPFANTELSPLEPMLRDVHALAEVLGNAIAVHRPSLPLRLPDALTPERRDAVPVA
RETRRAVSRDWWVYSFTQLANESPGTIEAAPRAVAEEGGAQDEPAVVVFDGDPRFGGSRF
GNVLHSVLERVDFGAWSHWLDAGMPEGERRHLVDALHGEGYADEDIDDGVDVLAPLVGHT
LTVPLPEGARLCDVPVDARLSEMEFHFALESTPVPRLLALLHEHDVLTQRHAFGNRQRLE
GLMTGKIDLVYAHDERYFVLDYKSNRLPAYDRASLAAAMDDSEYTLQALLYSLALHRWLR
FRLGDAYDYDTHFGGIRYLFCRGLDAARDDSPGVHAWRPARALIDGLDALFRHATHREEA
MA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgcacgacgccttcctggacctgccgctcgacggcgtccgcttgatcgag
gccagcgcgggcacgggcaagaccttcacgctcgctacgctggtcacgcgactggtcatc
gaacgcgggctgcgcgtcggccagatcctcgccgtcacctacaccgaagcggccacgcag
gagctgcgcgagcgcctgcgccttcggctcgaactcgcggcccggctcgccaatgaagtc
gcgctgatgcccaccacgctggacgacgacagcgaagcggcggtgacgcgcacgctgatc
gaacgccaagcgcgccgcgaggatccgctcgccctcgcgcgccgcctgcggcaggccgcg
cgcgagatggacctcgccgcggtgttcaccattcacggcttctgtgcgcgcgcactggcc
gaacacgcggtcgaagccggccagccgctgctcgcgccggaactcaccggcagcgagcgc
gagctgatcgacgccgtcgccacggacctgtggcggtcgctcggcagcgacgcggccgat
gcggagctgctgcagcagcaatggcgcacgcccgacgggctcgccggcgatctctacaag
ctgctctacgtgccgcgcctgcagcccgcgccgccgccggcgtcgccggatccgctgcgg
caactgctcgacgccgccgccgcgttgcgcgacgcgttcgccgcgcacggcgaggacgcc
tgcgccgcgctgcatgcggccatcgagaacaaggtgctcaacggcaccagctacaagtcc
gcgctgatcgacgacctgcgcaatgcgttgtcgcagtggtgcggtaacggcgatgcgtcg
gcgccggtgcacgaaaagctcgaccgcctcacgccacgcatgctggccgacaagaccaac
aagccgaagaagggcgcgccattgcaggcgccggtctcgccgttgttcgacgcggtggcg
cggtacctggacgcagcgaacgctcgcgaaacctggctcgcatcgcgtcgcatcgcgctc
gtgcatcgcgttcgcgacgccgccgccaaacggctggcagcgatcaaacgcctgcgccgc
gagcagactttcgacgacctcatcgccaacctcgccgatgcgctcgacggcccgtacggc
gcgcgcctcatcgaacggctgcgcgcgcagtacgcgttcgcgctggtggacgaattccag
gacaccgacccgcgccagtggtcgatcttcgagcgcatcttcggcagcggcgacgaacct
gcgctgttcctgatcggcgacccgaagcaggcgatctaccgcttccgcggcggcgacgtg
cacacctatctggccgcggccgaacgcgcgcagcgcgcgccggcgctggatcgcaatttc
cgttcccggccgtcggtcctgcaggccatcgcggcgctgtacgaacgcgcgggcgaggcc
gcattcgtcgacgaacgcatccgcttccgcgatgtcgagcccggcggtgcggtgcaggac
ggcgacttccgccgcgacggaaacaccgcgcccgcgctggacctctgcgtgctgccgccg
cccgacgacggacgccgtaattcgaagtggtatgtcggcgaagcgcgccagcttgcggcg
cttgcgtgcgtgaccgcgatccatggcctgctgtcggacgcacgcgaaggccgcgccgtc
ctgcgcgaacgcggcgccgaacgtacgccgcaatcgggcgacatcgcggtgctcgtgcgc
aaccacggcgaggcgacgctgatgcgcgaagcactctcgcgcgccggaattcccgccgtg
gccgccggacgccggagcctgttctcgaccgaacaggcgcgtgacgtgctcgcgttgctc
gaagcactgctgcgtcccgacgacgacgcgcgcctgcgcggcgcgctcgcgacgatgctg
gtcggcctcgacgcggacacgcttgcgcggttcgacgaggacgcgcaactgcatcgccac
tggcagctgcgcgcgctcgcgtggcgcgaccgctggcagcggcatgggccgctcgcgatg
ctcggcgatgtcgcggccgaacacgcgccgcgcctgctcgcgcaatccgatggcgagcgg
cggctcaccaacacgctgcagctggccgaagtgttgcaggaagccgacatcgaggcgatc
ggcgagcacgggctggtcgactggctgcgcacgcgcatcgccgaggccgacgacagcgac
gagacgcagcagctgcgcctggaatccgacgcgcgctgcgtgcagatcctcacgctgcac
aagagcaaggggctggaatacccgttcgtcttcctgccgttcgccgcgatcgggcgcgat
gcgcgcaacggcaacctgtgcgagttccacgacggcgagggccgcgtgctgcagctgcgc
agcgaagcgaccccggagaacgcatcggcctggaacgatgcgcgcatccggcatgaaaac
gaagagcgcggcgaggacgcgcgcctgctgtacgtcgggctcacgcgcgcgcggcatgcg
ctgtggctggccacaggccccttcgcgaataccgagctgagcccgctggagccgatgctg
cgcgacgtccacgcgctcgccgaagtgctcgggaatgcgatcgcagtgcatcggccttcg
ttgccgttgcgtctgcccgatgcattgacgcccgagcgtcgcgacgcggtgcccgtcgcg
cgcgagacgcggcgcgccgtgtcgcgcgactggtgggtgtacagcttcacgcagctggcc
aacgaatcgccgggcacgatcgaagccgcgccgcgtgcggtggcggaggagggcggcgcg
caggacgaaccggccgtggtcgtgttcgacggcgatccgcggttcggcggcagccgcttc
ggcaacgtgctgcattcggtgctggagcgcgtggatttcggcgcgtggtcgcattggctc
gacgcgggcatgcccgaaggcgagcgccggcatctcgtcgatgcgctgcacggcgaaggc
tatgcggacgaagacatcgacgacggcgtcgacgtgctcgcgccgctggtgggccacacg
ctgaccgttccgctgcccgaaggcgcgcgtctgtgcgacgtacccgtcgacgcgcgcctg
tcggaaatggagttccacttcgcgctggaatccacgcccgtcccgcgcctgctcgcgctg
ctgcacgaacacgacgtgctcacgcagcgccacgcgttcggcaatcgccagcgcctggaa
ggcctgatgaccggcaagatcgacctcgtgtacgcgcacgacgagcgctacttcgtgctc
gactacaaatccaatcgcctgcccgcgtacgaccgcgcgtcgctcgccgcggcgatggac
gacagcgagtacacgctgcaggcgctgctgtattcgctcgcattgcatcgctggctgcgc
ttccgtcttggcgatgcgtacgactacgacacgcacttcggcggcatccgctacctgttc
tgtcgcggcctcgatgccgcgcgcgacgactcgccgggcgtgcatgcgtggcggcctgcg
cgcgcgttgatcgacggcctcgacgcgctgttccgccacgcgacgcaccgcgaggaggcg
atggcatga
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