Lysobacter auxotrophicus: LA521A_02870
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Entry
LA521A_02870 CDS
T09075
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03420
Nucleotide excision repair
laux03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA521A_02870 (uvrD)
03430 Mismatch repair
LA521A_02870 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_02870 (uvrD)
Enzymes [BR:
laux01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA521A_02870 (uvrD)
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA521A_02870 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LA521A_02870 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BDU15086
UniProt:
A0ABM8D975
LinkDB
All DBs
Position
324515..326707
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AA seq
730 aa
AA seq
DB search
MDVSHLLDALNPAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWMNEVHGVPTHGILAV
TFTNKAAGEMRHRVDGQLRHGARGMWIGTFHGLAHRLLRLHWQEAKLPEGFQVLDSDDQL
RLVKRVVQALEFDETRFPPRQIVWWINAQKDEGRRPHNLQPTSGDPWADVMHKCYEAYQE
RCERAGLVDFAELLLRAHELLRDNPALLAHYRHRFREILVDEFQDTNAIQYAFVRVLAGD
TGHVFVVGDDDQSIYGWRGAKVENMQRFLKDFSGTHTIRLEQNYRSSANILEAANAVIAH
NPDRLGKNLWTDSGTGEPIDLYAAYNEMDEARFVVERLRQWVRDGGSYGEVAILYRSNAQ
SRAFEESLLSEQVPYRVYGGLRFFERAEIKDTLAYLRLIASRLDDAAFERAVNTPTRGIG
ERTLDEVRRRARADAVSLWEAARRIVNENGLTARARNAVAGFLALIDDLDNELGAMTLPE
KIDHALIRSGLREHYFNESRGQLDSRVDNLDELVSVASRFTRTDDEDAAAMPELVAFLSY
AALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGMEEGVFPSGRSTEEYGRLEEERR
LAYVGITRARQKLVLSYAESRRIHGADMYGVPSRFLREIPAPLLNEVRPKVQVSRPYSGG
VQRGVLGASRGHAPLEQPAVRLGSQVKHPSFGLGTVTDYEGSGAHARVQVNFDDAGSKWL
VLAYANLQPA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgctcgacgcgctgaacccagcgcagcgcgaggccgtcagcgcc
ccgcccggtcattacctcgtcctcgccggcgccggctccggcaagacccgcgtgctcacg
caccgcatcgcctggatgaacgaagtccacggcgtgcccacgcacggcatcctcgcggtg
accttcaccaacaaggccgccggcgagatgcgccaccgcgtcgacggccagctgcgccat
ggcgcgcgcggcatgtggatcggcaccttccacggcctcgcgcaccggctgctgcgcctg
cactggcaggaagccaagctgcccgaaggcttccaggtgctcgattccgacgaccagctg
cgtctggtcaagcgtgtcgtgcaggcgctggaattcgacgagacgcgcttcccgccgcgc
cagatcgtgtggtggatcaacgcgcagaaggacgaaggccgtcgcccgcacaacctgcag
cccaccagcggcgatccgtgggccgacgtgatgcacaaatgctacgaggcctaccaggag
cgctgcgaacgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaacccggcgctgctggcccattaccggcaccgtttccgcgagatccttgtc
gacgagttccaggacaccaacgccatccagtacgcgttcgtgcgcgtgctcgccggcgac
accgggcacgtgttcgtcgtcggcgacgacgaccagtcgatctacggctggcgcggcgcg
aaagtcgagaacatgcagcggttcctgaaggatttctccggcacgcacacgatccgcctc
gagcagaattaccgctccagcgcgaacatcctggaagcggcgaacgcggtcatcgcgcac
aaccccgatcgcctcggcaagaacctgtggaccgacagcggcacgggcgagccaatcgac
ctgtacgccgcgtacaacgaaatggacgaggcgcgtttcgtggtcgaacgcctgcgccaa
tgggtgcgcgatggcggcagctacggcgaggtcgccatcctctatcgcagcaacgcgcag
tcgcgcgcgttcgaagaatcgctgctgtccgaacaggtgccgtaccgcgtgtacggcggc
ctgcgcttcttcgagcgcgcggaaatcaaggacacactcgcgtacctgcgcctgatcgcc
tcgcgcctggacgacgcggcgttcgagcgcgccgtgaacacgccgacgcgcggcatcggc
gagcgcacgctggacgaagtgcgccgtcgcgcacgcgccgacgccgtatcgctgtgggaa
gccgcgcgccgcatcgtgaacgagaacggcctgaccgcgcgtgcgcgcaacgccgtcgcg
ggtttcctcgcgctcatcgacgacctcgacaacgagctgggcgcgatgacgctgccggag
aagatcgaccatgcgttgatccgctcggggcttcgcgagcattacttcaacgagtcgcgc
gggcagctggattcgcgcgtggacaacctcgacgaactcgtctctgtcgcctcgcgcttc
acgcgcacggacgatgaagatgcggcggcgatgccggaactggtcgccttcctcagctac
gccgcgctggaagccggcgaaggccaggcgcaggccggcgaggaaggcgtgcagctgatg
acgctgcacagcgcgaaggggctggagtttccgctggtgttcctggctggcatggaagag
ggcgtgttcccgagcggccgctccacggaagagtacggtcgcctggaggaggagcgccgc
ctcgcctacgtaggcatcacccgtgcgcggcagaagctggtgctgagctatgcggagtcg
cggcgcatccacggcgccgacatgtacggcgtgccgtcgcgcttccttcgcgagatcccg
gcgccgctgctcaacgaggtgcgcccgaaggtgcaggtgtcgcgcccatacagcggcggc
gtgcagcgcggcgtgctgggcgccagtcgcggccatgcgccactggagcagccggcggtg
cggctgggctcgcaggtgaagcacccgtcgttcgggctgggcaccgttaccgattacgag
ggcagcggcgcgcatgcgcgcgtgcaggtgaatttcgatgacgccggcagcaagtggctc
gtgctggcgtacgcgaacctgcagccggcgtga
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