Lysobacter auxotrophicus: LA521A_03060
Help
Entry
LA521A_03060 CDS
T09075
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA521A_03060 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laux03019
]
LA521A_03060 (rhlB)
Enzymes [BR:
laux01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LA521A_03060 (rhlB)
Messenger RNA biogenesis [BR:
laux03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LA521A_03060 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RhlB
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BDU15105
UniProt:
A0ABN6UFZ3
LinkDB
All DBs
Position
351859..353574
Genome browser
AA seq
571 aa
AA seq
DB search
MSDKPLTDVSFSSFDLHPSLLAGLEAAGFTRCTPIQALTLPIALQGRDVAGQAQTGTGKT
LAFLVAVMNRLLTRPALAERKPEDPRALILAPTRELAIQIHKDAVKFGSDLGLKFALVYG
GVDYDKQRELLQKGADIIIATPGRLIDYVKQHKVVSLHACEMCVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVEAETVTAARVRQKVFFPA
DDEKIPLLLGLLSRSEGARTMVFVNTKAFVERVARALEKGGYRVGVLSGDVPQKKRETLL
NRFQKGQLEILVATDVAARGLHIDGVSHVYNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKLPVAAVDADLLVAIPRPPREVPEGAEGEGENESIGSIFKEA
REQRAADEERRGGGRSRGAKPGGGSRGDGRREGGRREGGRDGAPRSERKPRTQPVEAAAK
SDVVDPSVIPTPDTERAPRKRRRRRGGRRIEGADAAQAAAPAQAAPKSPTQVHAQKAAAK
AAAKDGDKLGLLHRIGRSLKSLISRSPRSQH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcctcttaccgacgtttccttttcctcgttcgacctgcatcccagcctg
ttggccgggctcgaagccgccggcttcacccgctgcacgccgatccaggccctcacgctt
cccatcgccctgcagggtcgcgatgtcgccggccaggcgcagaccggcaccggcaagacg
ctggccttcctggtcgcggtgatgaaccgcctgctgacgcgtccggcgctcgccgagcgc
aagccggaagacccgcgcgcgctgatcctggcgcccacgcgcgaactcgccatccagatc
cacaaggacgcggtgaagttcggttccgacctgggactgaagttcgccctggtctacggc
ggcgtcgactacgacaagcagcgcgaactgctgcagaagggcgccgacatcatcatcgcc
acgcccggccgcctgatcgactacgtcaagcagcacaaggtcgtgtcgctgcacgcctgc
gagatgtgcgtgctcgacgaagccgaccgcatgttcgacctgggcttcatcaaggacatc
cgcttcctgctgcgccgcatgccgatccgcaccgagcgccagacgctgctgttcagcgcc
acgctgagccaccgcgtgctggagctggcgtacgaacacatgaacgagccggaaaagctc
gtcgtggaagccgagaccgtcaccgccgcgcgcgtgcgccagaaggtgttcttcccggcc
gacgacgagaagatcccgctgctgctcggcctgctctcgcggagtgagggcgcgcggacg
atggtgttcgtcaacaccaaggcgttcgtcgaacgcgtcgcgcgcgcgctggagaagggc
ggttaccgcgtcggcgtgctgtccggcgacgtgccgcagaagaagcgcgagacgctgctc
aaccgcttccagaagggccagctcgagatcctcgtcgcgaccgacgtggccgcgcgcggc
ctgcacatcgacggcgtctcgcacgtctacaactacgacctgccgttcgacgcggaggac
tacgtccaccgcatcggccgcaccgcccgcctcggcgcggaaggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgtcgctgccggacatcgaggcctacatcgaacagaagctg
ccggtggcggcggtggacgccgacctgctggtcgccatcccgcgcccgccgcgcgaagtg
cccgaaggcgcggaaggcgagggcgagaacgagagcatcggctcgatcttcaaggaagcg
cgcgagcagcgtgcggccgacgaggagcgccgcggcggtggtcgcagccgtggcgccaag
ccgggcggcggttcccgtggcgacggacgtcgtgaaggcggtcgccgtgaaggcggccgt
gacggcgcaccgcgcagcgagcgcaagccgcgcacgcagccggtcgaagccgcggcgaag
agcgacgtcgtcgatccctcggtcatcccgacgccggataccgaacgcgcgccgcgcaag
cgccgtcgccgtcgcggcggtcgccgcatcgagggcgccgacgccgcacaggccgccgca
ccggcgcaggccgcaccgaagtcgccgacccaggtccatgcgcagaaggcagccgccaag
gccgcggcgaaggacggcgacaagctcggcctgctgcatcgcatcggccgcagcctgaag
tcgctgatctcgcgttcgccgcgcagccagcactga
DBGET
integrated database retrieval system
