Lysobacter auxotrophicus: LA521A_03110
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Entry
LA521A_03110 CDS
T09075
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
laux
Lysobacter auxotrophicus
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laux03021
]
LA521A_03110 (rpoH)
Transcription machinery [BR:
laux03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LA521A_03110 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
HTH_3
UCR_14kD
IF2_N
HTH_11
KORA
HTH_10
HTH_25
GntR
Motif
Other DBs
NCBI-ProteinID:
BDU15110
UniProt:
A0ABM8D987
LinkDB
All DBs
Position
357167..358042
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AA seq
291 aa
AA seq
DB search
MTQNTLSLPLVSNNLPVPSALGSLDAYVNAVHRIPVLTAEDEQALARRFREGEDLDAARE
LVHSHLRFVVHVARGYNGYGLQLGDLIQEGNIGLMKAVKRFDPDQGVRLVSFAVHWIRAE
MHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAEEVRAVAQDLNVSEREVLEME
SRLSGRDIGFDAPDDDDDNAPPSPVAYLRTDAEDPSQTYEREDEEDNHLALLREGLSGLD
QRSRDIVKRRWLDSESKITLQELADEYGVSAERIRQIEANALKKMRALFAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaacaccttgtccctcccgctggtttccaacaacctcccggtgccgagcgcg
ctcggttcgctggacgcctacgtcaacgccgtgcatcgcatcccggtgctcacggccgaa
gacgagcaggcgctggcgcgtcgcttccgcgaaggcgaggatctcgacgccgcacgcgag
ctggtgcattcgcacctgcgcttcgtggtgcacgtcgcgcgcggctacaacggctacggc
ctgcagctgggcgacctcatccaggaaggcaacattggcctgatgaaggcagtcaagcgc
ttcgaccccgaccagggcgtgcgcctggtgtccttcgcggtgcactggatccgtgccgag
atgcacgagttcatcctgaagaactggcgcatcgtgaaggtcgccacgaccaaggcgcag
cgcaagctgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgccgag
gaagtccgcgcagtcgcccaggacctcaacgtgtccgagcgcgaagtgctcgagatggaa
tcgcgcctgtccggtcgcgacatcggcttcgacgcgccggacgatgacgacgacaacgcg
ccgccgtcgccggtcgcctacctgcgcaccgacgccgaagacccgtcgcagacgtacgag
cgcgaggacgaggaagacaaccacctcgccctgctgcgcgaaggcctgtcgggcctggac
cagcgttcgcgtgacatcgtcaagcgtcgttggctggactcggaaagcaagatcacgctg
caggaactggccgacgaatacggcgtcagcgccgagcgcatccgccagatcgaggccaac
gcgctgaagaagatgcgcgcgctgttcgccgcgtaa
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