Lysobacter auxotrophicus: LA521A_03370
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Entry
LA521A_03370 CDS
T09075
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
laux
Lysobacter auxotrophicus
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laux03032
]
LA521A_03370
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_03370
Enzymes [BR:
laux01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LA521A_03370
DNA replication proteins [BR:
laux03032
]
Prokaryotic type
DNA Topoisomerases
LA521A_03370
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LA521A_03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BDU15136
LinkDB
All DBs
Position
complement(389888..392389)
Genome browser
AA seq
833 aa
AA seq
DB search
MAKNLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPERGFAMRYDLIDKN
EKHVDAIAKAAKSADTLYLATDPDREGEAISWHIAEILKERGLLEGKPLHRVVFTEITPR
AIKEAMTQPRSIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWTIEAECAHPSQAFTAKLIKLDGKKFEQFTVTDGDTAEDARKRITA
AANGALHVTDVASKERKRRPAAPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGEE
GTVGLITYMRTDSVTLSQDAIVEIRDVIARDYGTRALPDKPNTYQNKSKNAQEAHEAVRP
TSALRTPSSVARFLSDDERKLYELVWKRAIASQMVPATLNTVSVDLAAGAEHAFRASGTT
VVDPGFLAAYEEGRDTKAAEDEDEGRKLPAMKTGDRVPLDRIHADQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTRYVDYDF
TAKLEDELDAVSRGEEEWVPLMEKFWGPFKELVEDKTESVDRSEATGARELGTDPKSGKP
VSVRLGRFGPYAQIGDKDTDEKLEFASLRPGQSMHTITLEDALELFKLPRKLGENDGHEV
SVGIGRFGPFAKRGSTYASLTKEDDPYTIDLARAVFLIEQKEEIARNRIIRQWDGSDVQV
LNGRFGPYISDGKLNGKIPKDREPASLSLEEATQFLADTGKPVRRGFGKKATKKEPAVKV
KKDAAAKKAPAAKKAPAKKAAAKKTAAKKAAKTTAAKAPAKKAAKKVVKKAKA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaatctcctcatcgtcgagtcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttcaccgtcctggcctcctacggccacgtccgcgacctggtgcccaag
gaaggcgccgtcgatccggagcgcggcttcgccatgcgctacgacctgatcgacaagaac
gagaagcacgtcgacgccatcgcgaaggccgccaagtccgccgacaccctgtacctggcg
accgacccggaccgcgaaggcgaggcgatcagctggcacatcgcggaaatcctcaaggag
cgcggcctgctcgaaggcaagccgctgcaccgcgtggtgttcaccgagatcacgccgcgc
gcgatcaaggaagcgatgacgcagccgcgttcgatcgcctccgacctggtggacgcgcag
caggcgcgccgcgcgctggactacctggtcggcttcaacctgagcccggtgctgtggcga
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcggatgatcgtc
gagcgcgaggaggagatcgaagccttcgtcgcgcgcgagtactggacgatcgaggccgaa
tgcgcgcatccgtcgcaggccttcaccgccaagctgatcaagctcgatggcaagaagttc
gagcagttcacggtgaccgacggcgacaccgccgaggacgcccgcaagcgcatcaccgcc
gccgccaacggcgcgctgcacgtcaccgacgtcgcctcgaaggagcgcaagcgccgcccg
gccgcgccgttcaccacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acgcgcaagaccatgcaggtcgcgcagaaactgtacgaaggcgtggcgatcggcgaggaa
ggcacggtcggcctaatcacctacatgcgtaccgactcggtgacgctgtcgcaggacgcc
atcgtcgagatccgcgacgtgatcgcgcgcgactacggcacgcgcgcgctgccggacaag
ccgaacacctaccagaacaagtcgaagaacgcgcaggaagcgcacgaagccgtgcgcccg
acctccgcgctgcgcacgccgtcatcggtcgcgcgcttcctcagcgacgacgaacgcaag
ctctacgaactggtctggaagcgcgccatcgcctcgcagatggtgcccgccacgctcaac
accgtgtcggtcgacctcgctgccggcgccgagcacgcgttccgcgcgtcaggcacgacg
gtggtcgacccgggctttcttgccgcgtacgaggaaggccgcgacaccaaggccgccgag
gacgaggacgaaggccgcaagctgccggcgatgaagaccggcgaccgcgtgccgctggac
cgcatccacgccgaccagcatttcacccagccgccgccgcgctacacggaagctgcgctg
gtgaaggcgctggaggaatacggcatcggccgtccgtccacgtacgcctcgatcatccag
acgctgctgttccgcaagtacgtggagatggaaggccgcagcttccgcccgtccgacgtg
ggccgcgcagtgtcgaagttcctgtcgtcgcacttcacgcgctacgtggactacgacttc
accgccaagctcgaggacgaactcgacgccgtctcgcgcggcgaggaggaatgggtcccg
ctgatggagaagttctggggcccgttcaaggagctggtcgaggacaagaccgaatcggtc
gatcgcagcgaagccaccggcgcgcgcgaactcggcaccgacccgaagtccggcaagccg
gtgagcgtgcgcctgggccgtttcgggccgtatgcgcagatcggcgacaaggacaccgac
gagaagctcgaattcgcgtcgctgcgcccgggccagtcgatgcacaccatcacgctggaa
gacgcgctggagctgttcaagctgccgcgcaagctcggcgagaacgacggccacgaagtc
agcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcacgtatgcctcgctg
acgaaggaagacgatccgtacacgatcgacctggcgcgcgcggtgttcctgatcgagcag
aaggaagagatcgcgcgcaaccgcatcatccgccagtgggatggcagcgacgtgcaggtg
ctcaacggccgcttcggtccgtacatcagcgacggcaagctcaacggcaagatcccgaag
gatcgcgagccggcatcgctgtcgctggaggaagccacgcagttcctcgccgacaccggc
aagccggtgcgtcgcggcttcggcaagaaggcgacgaagaaggaaccggcggtcaaggtg
aagaaggacgccgccgccaagaaggcgccggccgcgaaaaaggcacccgcgaagaaggcc
gcggcaaagaagactgccgccaagaaggcagcgaagacgaccgctgcgaaggcgcccgcg
aaaaaggcggcgaagaaggtcgtgaagaaggcgaaggcgtaa
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