Lysobacter auxotrophicus: LA521A_03440
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Entry
LA521A_03440 CDS
T09075
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
laux
Lysobacter auxotrophicus
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
laux03009
]
LA521A_03440 (rsmB)
Enzymes [BR:
laux01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LA521A_03440 (rsmB)
Ribosome biogenesis [BR:
laux03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LA521A_03440 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_5
Methyltransf_25
Cons_hypoth95
MTS
FtsJ
UPF0020
DUF3322
Motif
Other DBs
NCBI-ProteinID:
BDU15143
UniProt:
A0ABM8D9A4
LinkDB
All DBs
Position
398352..399671
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AA seq
439 aa
AA seq
DB search
MKPHSAKQPPGVQTRVVATRVLDAVLHRGRSLKAELSQALPTLADPRDRALVEAICFAVL
RQPARFESALSAWMSKPLGYRDGELKALLFVGLAQLDPLKLPAHAALASTVDAARAIGRT
HQAGLVNALLRRAQREGVPAGDAHAHWPAWLRERIAADWPQDETAILDASVSEPPMWLRV
NRRRTTPADYLQRLRDAGIAADLDENAADALRLEPPVAVAALPGFADGDVSVQDASAQLV
IDAMSPASGARVLDACVAPGGKAAHLLERDATLRLSAIDIDAQRLVRVRENLSRLKLGGS
IQLAAVDAADTKAWWDGVPFDAVLLDAPCSATGIVRRQPDVLQHRRASDLDALIATQTRL
LDALWTTVAPGGVLLYATCSILKAENEAQVEAFLSRTPDAVAEPLDGRFGRPAGAGRQRL
PGEHGYDGFYYARLRKRSA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcattccgccaagcagccgcccggcgtacagacgcgcgtcgtcgccacgcgc
gtgctcgatgcggtgctgcatcgcggccgctcgctcaaggccgagctgtcgcaggcgctg
ccgacactggccgatccgcgcgatcgcgcgctggtggaagcgatctgcttcgccgtgctg
cgccagccggcccgtttcgaatccgcgctgtcggcctggatgagcaagccgctgggttat
cgcgatggcgagctcaaggcgctgctgttcgtcggcctcgcgcagctcgatccgctgaag
ttgccggcgcacgcggcgctcgcgtccacggtcgatgcggcgcgtgcgatcggacgcacg
caccaggccggactggtgaacgcgctgctgcgtcgcgcgcaacgcgaaggcgttcccgcc
ggcgacgcgcatgcgcattggccggcatggcttcgcgagcgcatcgccgccgactggccg
caggatgaaaccgcgatcctcgacgccagcgtgtccgagccgccgatgtggctgcgcgtg
aaccgccgtcgcacgacgccggccgattacctgcaacgcctgcgcgacgcaggcatcgcg
gccgatctcgacgaaaacgcggcggacgccttgcgtctggaaccgcccgtcgcggtcgcc
gccttgccgggcttcgccgatggcgacgtctccgtgcaggacgcctccgcgcagctggtg
atcgatgcgatgtcgcccgcgagcggcgcgcgcgtgctcgacgcctgcgtcgcgcccggc
ggcaaggccgcgcatctgctcgaacgcgacgcgaccctgcgcctttcggccatcgacatc
gatgcgcagcggctggtgcgcgtgcgcgaaaacctgtcgcgactgaagctcggcggcagc
atccagctcgccgcggtcgatgcagccgacacgaaggcgtggtgggacggcgtgccgttc
gatgcggtgctgctcgacgcgccgtgttcggcgaccggcatcgtgcgtcgccagcccgac
gtgctgcagcaccgccgcgcgtccgacctcgacgcgctcatcgccacgcagacgcgcctg
ctcgatgcgctgtggaccaccgtcgcacccggcggcgtgctgttgtacgcgacgtgttcg
atcctgaaagccgagaacgaagcgcaggtcgaagcgttcctttcgcgtacgccggatgcc
gtcgccgagccgctcgacgggcgcttcggccgtcccgccggtgccggtcgacagcgcctg
ccgggcgaacacggctacgacggcttctactacgcgcgactgcgcaagcgttccgcgtaa
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