Lysobacter auxotrophicus: LA521A_04260
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Entry
LA521A_04260 CDS
T09075
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux00040
Pentose and glucuronate interconversions
laux01100
Metabolic pathways
laux02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LA521A_04260
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA521A_04260
Enzymes [BR:
laux01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LA521A_04260
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BDU15225
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Position
complement(500125..501462)
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AA seq
445 aa
AA seq
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MSVRTTFATLTFALPLLAHAAQDPARQTIAPDDGWASHPTAALPYGTTGGSAADDAHVFT
VSDRNALVAALNFPDATPKIVRIEGMIDANVDATGQPLTCADYARPDPQTGELYSLDAFL
AAYDPATWGRVNPNGPQERARAASASAQQARVRIRVPANTTIIGANHGDGLRGAWLDIRP
GSTTGNQPMNVIVRNLVLVDSADCFPQWSPTDGADGNWNALYDAISVRNATHVWIDHNAM
LDVATRDEDAPTYFGRLYQRHDGLVDVTNESDFVTVSWNLMANHDKAMLIGSSDSAVADR
DKLRVTLHHNLFHDLGQRVPRVRYGQVHVFNNQYTLTADGAQTYAYSWGAGIESKIFAQN
NHFVVPSAVTPDLFAERFNGTALHDEGTMRNGVSKHARVDVVDAYNAANPVPLSNDVGWT
PTLYRRIDPTVVVPISVVLGAGPFK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccgcaccaccttcgccaccctcaccttcgcgctgccgctgctcgcgcatgcg
gcccaggatcccgcgcgacagaccatcgcaccggacgacggctgggcatcgcaccccacc
gccgccttgccctacggcaccaccggcggttccgcggccgatgacgcgcacgtgttcacc
gtgtccgaccgcaacgcactcgtggccgcgctgaatttccccgacgccacgccgaagatc
gtccgcatcgaaggcatgatcgatgcgaacgtcgatgcgaccggccaaccgctcacctgc
gccgactacgcccgcccggatccgcagaccggcgagctgtactcgctggacgcgttcctc
gccgcctacgacccggcgacctggggacgcgtgaatcccaacggcccgcaggagcgtgca
cgcgcggcgtccgcttcggcgcagcaggcccgcgtgcgcatccgcgtgcccgccaacacc
acgatcatcggcgcgaaccacggcgacgggctgcgcggcgcgtggctcgacatccgcccc
ggttcgaccaccggcaaccagccgatgaacgtcatcgtgcgcaacctggtgctggtcgac
agcgccgactgcttcccgcagtggtcgccgaccgacggcgccgacggcaactggaacgcg
ctgtacgacgcgatttcggtgcgcaacgcgacgcacgtgtggatcgaccataacgcgatg
ctcgacgtcgccacgcgcgacgaagatgcgccgacgtatttcggccgtctctaccagcgc
cacgacggtctggtcgacgtcaccaacgaatcggacttcgtcaccgtgtcatggaacctg
atggcgaaccacgacaaggcgatgctgatcggctcgtccgacagcgccgttgccgatcgc
gacaagctgcgcgtgacgctgcaccacaacctcttccacgacctcggccagcgcgtgccg
cgcgtgcgctacggccaggtgcacgtgttcaacaaccagtacacgctgaccgccgatggc
gcgcagacgtatgcgtacagctggggcgcgggcatcgaatcgaagatcttcgcgcagaac
aaccacttcgtcgtgccgtcggcggtgacgccggatctgttcgccgagcgattcaacggc
accgcgctgcatgacgaaggcacgatgcgcaacggggtctccaagcacgcgcgcgtggac
gtggtcgatgcgtacaacgcggccaacccggtgccgctgtcgaacgacgtgggctggacg
ccgacgctgtatcggcgcatcgacccgaccgttgtggtgccgatctcggtggtgctgggg
gcggggccgttcaagtga
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