Lysobacter auxotrophicus: LA521A_04800
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Entry
LA521A_04800 CDS
T09075
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux00550
Peptidoglycan biosynthesis
laux01100
Metabolic pathways
laux01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LA521A_04800 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA521A_04800 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
laux01011
]
LA521A_04800 (mrdA)
Enzymes [BR:
laux01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LA521A_04800 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
laux01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LA521A_04800 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDU15279
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All DBs
Position
556605..558659
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AA seq
684 aa
AA seq
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MGPRRRVLKNSAAEANQFRLRSAIAFLCVLAALVGLGFWYFRLQVWEHDDYATRSEANRI
KLRPVVPGRGLILDRKGRVLADNVPAYRIEVTPFEAGKTEEWLPALRRIIALTPEDVARF
DDERRATRGYKPITLKLRVTEEEAARFAVDRWRYPGVDLVPYLNRRYPYGELLSHVIGYV
GRIDADDLKELGEGGAALTHIGKTGLERYYEEALRGKVGYEQIETNVDGRPMRQVGHVPA
TPGADLRLSIDLDLQQAMVTAFGDMDGSAIAMDPRTGEILAMVSLPGYDTNLFVNGISNV
DYRALMDNPSRPLFNRNVLGGGPPGSTVKPLIGLAGLDSGLRTPDSKVFSTGTFYIPGQK
RGWRDAHGGAGWTDLRKSIAASVNYYYYKLAYDMGIERFDEYMRRYGFGDKTGIDLAGEN
KGVVPSPQWKRTRSKEPWYAGETVNAGIGQGYWIATTLQLVRGTAAIANGGNLVRPHLVA
ERRDGYNTPWLPLKQPEAPRITDNPSNLRAVQEGMMATMGPGGTGRAMAAGAPYLMAGKT
GTAQKISRKGSQSFDPHSLPYHLRHQALFVGYAPADNPTIVVAISVEHGGFGGSTAAPIA
RKIFDAWLLGKMPEPVPTDPKYTRPTQPRAAPVVAAAATQGAPVAPILPTGRAGAAAVKP
ASAAPAAANPPPPPATTAPQEPTR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgcgccgccgcgtcctgaagaacagcgccgccgaagccaaccagttccgactg
cgctccgcgatcgccttcctgtgcgtgctggcggcgctggtcgggctgggcttctggtat
ttccgcctgcaggtgtgggagcacgacgactacgccacgcgctcggaggccaaccgcatc
aagctgcgccccgtcgtgccggggcgcgggctgatcctggatcgaaagggtcgcgtgctg
gccgacaacgtgccggcgtaccgcatcgaagtaaccccgttcgaagccggcaagaccgag
gaatggctgcccgcgctgcgcaggatcatcgcgctgacgccggaagacgtcgcgcgcttc
gacgacgagcgtcgcgccacgcgcggttacaagccgatcacgctgaagctgcgcgtcacc
gaggaggaagccgcgcgcttcgcggtcgaccgctggcgctatccgggcgtggacctcgtg
ccgtatctcaaccggcgctatccgtacggcgaactgctctcgcacgtcatcggctacgtc
ggacgcatcgacgcggacgacctgaaggagctcggcgaaggcggcgcggcgctcacgcac
atcggcaagaccgggctggagcgctattacgaggaagcgctgcgcggcaaggtcggctac
gagcagatcgagaccaacgtcgatggccggccgatgcgccaggtcggccacgtgcccgcg
acgccgggcgccgacctgcgcctgagcatcgacctggacctgcagcaggcgatggtgacg
gcgttcggcgacatggacggttcggccatcgcgatggacccgcgcaccggcgagatcctc
gcgatggtcagcctgccgggctacgacacgaacctcttcgtcaacggcatctcgaacgtc
gattaccgcgcgctgatggataacccgtcgcgtccgctgttcaaccgcaacgtgctcggc
ggcggcccgccgggctcgacggtgaagccgctgatcggcctcgcaggcctggacagcggc
ctgcgcacgccggactcgaaggtgttctcgaccggcacgttctacatccccggccagaag
cgcggctggcgcgacgcgcacggcggcgcgggctggaccgatctgcgcaagtcgatcgcc
gcgtcggtgaactactactactacaagctcgcctacgacatgggcatcgagcgcttcgac
gaatacatgcgccggtatggattcggcgacaagaccggcatcgacctggccggcgagaac
aagggcgtggtgccgtcgccgcaatggaagcgcacccgcagcaaggagccgtggtacgcg
ggcgagacggtgaacgccggcatcggccagggttactggatcgccacgacgctgcagctc
gtgcgcggcaccgcggcgatcgccaatggcggaaacctcgtgcgcccgcacctggtggcg
gagcgccgcgacggctacaacacgccgtggctgccgctgaagcaacccgaggcgccgcgc
atcaccgacaacccgtccaacctgcgtgccgtgcaggaaggcatgatggcgacgatgggc
cccggcggtacgggccgcgcgatggccgcaggcgcgccgtacctcatggccggcaagacc
ggcaccgcgcagaagatcagccgaaaaggcagccagagtttcgatccgcattcgctgccg
taccacctgcgccaccaggcgctgttcgtcggctacgcgccggcggacaacccgacgatc
gtggtcgcgatttcggtcgaacacggcggcttcggcggcagcaccgcggcgccgatcgcg
cgcaagatcttcgacgcctggctgctcggcaagatgcccgagccggtgccgaccgatccc
aagtacacccggccgacgcagccgcgcgcggcaccggtcgtcgcggccgccgcgacgcag
ggcgcgccggtggcgccgatcctgccgacgggccgcgccggtgcggctgcggtgaagccg
gcgagcgccgcgccggcagccgccaacccgccgccgccgccggcgacgaccgcgccgcag
gagcccacccgatga
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