Lysobacter auxotrophicus: LA521A_07210
Help
Entry
LA521A_07210 CDS
T09075
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux00260
Glycine, serine and threonine metabolism
laux00460
Cyanoamino acid metabolism
laux00630
Glyoxylate and dicarboxylate metabolism
laux00670
One carbon pool by folate
laux00680
Methane metabolism
laux01100
Metabolic pathways
laux01110
Biosynthesis of secondary metabolites
laux01120
Microbial metabolism in diverse environments
laux01200
Carbon metabolism
laux01230
Biosynthesis of amino acids
laux01240
Biosynthesis of cofactors
laux04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LA521A_07210
09102 Energy metabolism
00680 Methane metabolism
LA521A_07210
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LA521A_07210
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LA521A_07210
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LA521A_07210
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LA521A_07210
Enzymes [BR:
laux01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LA521A_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DUF732
Motif
Other DBs
NCBI-ProteinID:
BDU15520
LinkDB
All DBs
Position
817208..818461
Genome browser
AA seq
417 aa
AA seq
DB search
MFPSSARIAGYDDELAQAIANEARRQEDHVELIASENYASPRVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRLKQLFGADYANVQPHSGSQANQAVYLALLNPGDTILGMS
LAHGGHLTHGAKVNVSGKLFNAVQYGVNDQGLIDYDEVEKLALEHKPKMVVAGFSAYSQQ
IDWARFRAIADKVGAILFVDMAHVAGLVAAGVYPNPLPHAHVVTSTTHKTLRGPRGGIIV
AKGAGEEIEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFTAYQQQVVKNAQAMAK
TIIARGYKIVSGGTQNHLMLIDMIGKGVTGKDAEAALGRAHITVNKNAVPNDPQKPFVTS
GLRIGTPAVTTRGYQEADCIELANWICDVLDAPKDETVIAAVREKVTAQCAKFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttccccagctccgcccgcatcgccggttacgacgatgaactcgcccaggccatcgcc
aacgaggcgcgccgccaggaggaccacgtcgagctgatcgcctcggagaactacgcttcc
ccgcgcgtgatggaggcccagggcagcgtgctgaccaacaagtacgccgaagggtatccg
ggcaagcgctactacggcggctgcgagtacgtggacgtcgcagaacagctcgcgatcgac
cgcctgaagcagctcttcggcgcggattacgcgaacgtccagccgcattcgggcagccag
gccaaccaggccgtttacctcgcgctgctcaatccgggcgacacgatcctcggcatgtcg
ctggcccacggcggccacctgacccacggcgcgaaggtcaacgtcagcggcaagctgttc
aacgcggtccagtacggcgtgaacgaccagggcctgatcgactacgacgaggtcgagaag
ctcgcgctggaacacaagccgaagatggtcgtcgccggtttctcggcgtattcgcagcag
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggcgcgatcctgttcgtcgac
atggcgcacgtggccggcctggtcgccgccggcgtgtacccgaacccgctgccgcacgcg
cacgtggtcacgtccaccacgcacaagacgctgcgcggtccacgcggcggcatcatcgtc
gccaagggcgccggcgaggagatcgagaagaagctgcagtcgatcgtcttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccgccaaggcggtggccttcaaggaagcgctc
gagccggaattcaccgcctaccagcagcaggtggtgaagaacgcgcaggcgatggcgaag
acgatcatcgcgcgcggctacaagatcgtttccggcggcacgcagaaccacctgatgctg
atcgacatgatcggcaagggcgtgaccggcaaggacgccgaagccgcgctcggccgcgcg
cacatcaccgtcaacaagaacgcggtgccgaacgacccgcagaagccgttcgtcacctcc
ggcctgcgcatcggcacgccggccgtcaccacccgcggctaccaggaagccgactgcatc
gagctggcgaactggatctgcgacgtgctggacgcgccgaaggacgagaccgtcatcgcc
gccgtgcgcgaaaaggtgacggcgcagtgcgcgaagttcccggtgtatggctga
DBGET
integrated database retrieval system