Lysobacter auxotrophicus: LA521A_10330
Help
Entry
LA521A_10330 CDS
T09075
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LA521A_10330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
laux03000
]
LA521A_10330
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_10330
Enzymes [BR:
laux01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LA521A_10330
Transcription factors [BR:
laux03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LA521A_10330
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LA521A_10330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BDU15832
LinkDB
All DBs
Position
complement(1149594..1151189)
Genome browser
AA seq
531 aa
AA seq
DB search
MPDSHAHVHADTLPAFHVCEQARRTRDPRFDGLFFTAVLSTRIYCRPVCPAVTAKRVVYF
RHAAAAEAAGYRPCLRCRPELSPDDGSWRRGDAAVARALKLIDDGALAEQPLSALAERVG
LGERQLRRLFVERIGVAPMGVHGTRRLLFAKQLLTETDLPITQIALASGFASLRRFNDAF
RTAYRMAPRDLRRSRREAHGSNEATGDVLTLRLGYRPPYDFAAMLDFLRGRALPGVEVVD
EHGYARVIGPIERPGWLRVSAWPDGKHGGEHALKLELHGPAPSQLLEIVQRLRRMFDLDA
DPQAIADTLSRDPRFAPLLALRPGLRLPSGWDGFEIAVRAIIGQQVSVAAARTLASRLAH
KYGQALPTPFADARVSGALTHLFPTPEALVDADLETIGLIRSRAQTVRGVAQALLHGRVD
FRAERTLEDFVSRWVALPGIGPWTAQYIALRALGHPDAFPVEDLVLQKALPADGTRLTAK
ALAARAEAWRPWRGYAVIHLWRDSVPAPVVRAEKPARPKRNVVRADVDATA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgccggactcccacgcccacgtccacgccgacacccttcccgccttccacgtgtgcgag
caggcgcgtcgcacccgcgatccacggttcgacgggttgttcttcaccgcggtgctgagc
acgcgcatctattgccggcccgtgtgcccggcggtgacggccaaacgcgtggtgtatttc
cgccacgcggcggccgccgaggccgcgggctaccggccgtgcctgcgttgccggccggag
ctgtcgccggacgacggcagctggcgacgcggcgacgccgccgtggcgcgcgcactcaag
ctcatcgacgacggtgcgctggccgaacaaccgctgtccgcgctggccgagcgcgtgggc
ctcggcgagcgccagctgcgccgcctgttcgtcgaacgcatcggcgtcgcgccgatgggt
gtgcacggcacgcgacggctcctgttcgccaagcagctgctgaccgagaccgacctgccg
atcacgcagatcgcgctcgcctcgggcttcgccagcctgcggcgcttcaacgacgccttc
cgcaccgcgtaccgcatggcgccacgcgacctgcgtcgcagtcgacgcgaagcgcacgga
tcgaacgaagccaccggcgacgtcctcacgctgcggctcggttatcgcccgccgtacgac
ttcgccgcgatgctggatttcctgcgcggccgcgccctgccgggcgtggaagtcgtcgac
gaacacggctatgcgcgcgtgatcggtcccatcgaacggcccggctggctgcgcgtgagc
gcgtggcccgacggcaagcacgggggcgaacacgcgctcaagctcgaactgcacggtccg
gccccgtcgcaactgctcgagattgtccagcggcttcgacgcatgttcgacctcgacgcc
gatccgcaggcgatcgccgacacgctgtcgcgcgatccgcgtttcgcgcccctgctcgcg
ctgcgccccgggctgcggctgcccagcggctgggacggcttcgagatcgcggtgcgcgcg
atcatcggccagcaggtcagcgtcgccgccgcgcgcacgcttgcgtcgcgactcgcgcac
aagtacgggcaggcgttgccgacgccctttgccgacgcgcgtgtttcgggtgcgctgacg
catctgttccccacgccggaagcgctcgtcgatgcggacctggaaaccatcggcctgatc
cgctcgcgcgcgcagacggtgcgcggcgtcgcgcaggcgctgctccacggacgcgtggat
ttccgcgccgagcgcacgctcgaggatttcgtgtcgcgatgggtcgccctgcccggcatc
gggccgtggacggcgcaatacatcgcgctgcgtgcgctggggcatccggacgcgttcccc
gtcgaggacctcgtactgcagaaggccctccccgccgacggcacgcggctcacggcgaag
gcgctggcggcgcgcgcggaagcgtggcgcccgtggcggggctacgcggtgatccatctg
tggcgcgactcggtgccggcgcccgtcgtgcgggcagaaaaacccgcgcgacccaagcgg
aacgtcgtgcgcgcggacgtggacgcgaccgcatga
DBGET
integrated database retrieval system
