Lysobacter auxotrophicus: LA521A_10730
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Entry
LA521A_10730 CDS
T09075
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
laux
Lysobacter auxotrophicus
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laux03016
]
LA521A_10730 (truD)
Enzymes [BR:
laux01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LA521A_10730 (truD)
Transfer RNA biogenesis [BR:
laux03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA521A_10730 (truD)
Prokaryotic type
LA521A_10730 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BDU15872
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All DBs
Position
1192080..1193132
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AA seq
350 aa
AA seq
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MSEPTLPRAHGDAVLSANMRTTPEDFVVEEIPGFEPTGAGEHLLLTVEKRGMNTGFAAKH
IAQWAGVGEVAIGYAGLKDRHAVTRQRFSVHLPKKVAPDLSTLDFVQGEERLTVVEHTWH
AKKLPRGALAGNRFVLTLRAVRGERDAIGQRLAAIAERGVPNYFGEQRFGRDGDNVANAR
AMFNGRRVRREQRTLLISAARSELFNRVLAQRVQRGCWDTPLDGEVWMLDGSRSVFGPEP
FDDALALRLASFDIHPTGPLWGRGEPRTTGEAAQLEAEALSGEEALALRAGLEAEGLKQE
RRALRLKPAELAWSWREDDVLELAFALPPGTYATVVLAELGLVTSVGRAG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagccgacgctgccgcgcgcgcatggcgacgccgtcctgtcggcgaacatgcgc
acgacgccggaggatttcgtcgtcgaggaaatccccggattcgagccgaccggcgccggc
gagcacctgctgctcacggtcgagaagcgcggcatgaacaccggcttcgcggcgaagcac
atcgcccagtgggcgggcgtgggcgaagtcgccatcggttacgcgggcctgaaggatcgc
cacgccgtcacgcgacagcgtttcagcgtgcacctgccgaagaaggtcgcgccggacctg
tcgacgctggatttcgtgcaaggcgaggaacgccttaccgtcgtcgaacacacctggcat
gcgaagaagctcccgcgcggcgcgctggccggcaaccggttcgtgctgacgctgcgtgcc
gtgcgcggcgaacgcgatgcgatcgggcagcgcctggcggcgatcgccgagcgcggcgtt
cccaactatttcggcgagcagcgtttcggccgcgacggcgacaacgtggccaacgcgcgc
gcgatgttcaacggccgtcgcgtgcgccgagagcagcgcacgctgctgatttcggccgcg
cgttcggagctgttcaaccgcgtgctcgcacagcgcgtgcagcgcggctgctgggacacg
ccgctcgacggcgaggtgtggatgctcgatggcagtcgcagcgtgttcgggcccgaaccg
ttcgacgatgcgctggcgctgcggctggcgtcgttcgacatccatccgactggcccgctg
tggggacgcggcgaaccgcgcacgacgggcgaggccgcgcaactcgaggccgaggcgctc
tccggcgaggaggcgctcgcgttgcgtgcgggcctggaagccgaaggcctcaagcaggag
cgccgggcgctgcgcctgaagccggcggaactggcgtggtcgtggcgtgaggacgacgtg
ctggagctcgctttcgcgttgccgccggggacgtacgcgacggtcgtgctcgccgaattg
ggcctcgtgacgtcggtcgggcgcgccggctag
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