Lysobacter auxotrophicus: LA521A_11500
Help
Entry
LA521A_11500 CDS
T09075
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03030
DNA replication
laux03430
Mismatch repair
laux03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA521A_11500 (dnaE)
03430 Mismatch repair
LA521A_11500 (dnaE)
03440 Homologous recombination
LA521A_11500 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laux03032
]
LA521A_11500 (dnaE)
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_11500 (dnaE)
Enzymes [BR:
laux01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA521A_11500 (dnaE)
DNA replication proteins [BR:
laux03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA521A_11500 (dnaE)
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA521A_11500 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PG_binding_5
Motif
Other DBs
NCBI-ProteinID:
BDU15949
UniProt:
A0ABN6UI08
LinkDB
All DBs
Position
complement(1282380..1285958)
Genome browser
AA seq
1192 aa
AA seq
DB search
MPAVPFVHLHLHSEYSLADSTIRIGELVKRCVALSQPAVALTDLDNLFAAVKFYKAAEGA
GIKPIIGADVGLADGNETAARMTLLCRDRAGYLTLSRLLTRAWMEGHRTDGVALRPEWLR
EDNGGLFALAGRHSLAGRLATSNRHELAEAWLMDWRGVFGERLHLELTRTGREGEDAFNA
FALHASSKRSLPVIASNDVRFLDAEGFDAHEARVCIASGRVLDDPKRPKDYSPEQFLKSS
HEMQALFADVPDAIDNAFALATRCNVEMKLGEYALPAFPVPSEHTIESWLRGTAREGLDK
RLQKNPLAPGRTREDYDARLDIELDVIIKMGFPGYFLIVADFINWAKDHDIPVGPGRGSG
AGSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRD
RVSQIITYGTMAAKAVVRDTGRVLGHPYGFVDGIAKLIPNTLGISLDDAMGESEASKQDP
MLASGDLIQRYHAEEDVRDLLDLARSLEDLTRNAGKHAGGVVIAPSPLSDFCPLFAEHDG
EGRGRNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINKRLADAAAKGIDAGPAM
NHTFKDTATPQFDITALPLDDKLSYELFARGDTVAVFQFESRGMRELLKRARPDTFEDII
ALAALFRPGPLGSGMDREWVDRKHGNTEVTYPHESLEPVLSPTYGVIVYQEQVMQIAQVL
AGYTLGGADMLRRAMGKKKPEEMAKERAKFEAGCKERGIDPKTSSPIFDLMEKFAEYGFN
KSHSAAYALVAYQTAWLKVHYPAEFMAAVLSSDMDNTEKVTSFLDECRVMGLNVLPPDVD
ASAYMFEAKDANTIRYGLGAVKGVGRGACEAIVEARRAGEFADLLDFCKRVDSGKLNRRA
LEALTQAGALDKLGKNRASLMLQLPEVLKATDQLAKEREAGQVSLFGGFETAAPALHLDL
PETDEWPLTQILHGERETLGHYLSGHPFDPYRDEVRGLIGNDLSGLEKIWENRPEQRGGW
RQEVETIVAGLVVGLRKKGDSQMFVQIEDGRGRLECAFFNESYSEFAQLLVRDRLLVIQG
GLREDSFSGGFALRASRCWSFEQICEKHAQRLMLRLDLREPGTMQRVDAVLSSFRPGSTP
IRMDLLVRRGAAGSLDLNGTQSIRADADLASRLRATPGVRAVKLALSKPWAN
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtccccttcgtccatctccatctccacagcgaatactcgctcgccgactcg
acgatccggatcggcgagctggtgaagcgctgcgtcgcgctttcgcagcccgcggtcgcg
ctgaccgatctcgacaacctcttcgccgcggtcaagttctacaaggccgccgaaggcgcc
ggcatcaagccgatcatcggcgccgacgtcggcctggccgacggcaacgagaccgccgcg
cgcatgaccttgctgtgccgcgatcgcgccggctacctcacgctttcgcgcctgctgacg
cgcgcgtggatggaaggccatcgcaccgatggcgtcgcgcttcgccccgaatggctgcgc
gaagacaacggcggcctgttcgcgctcgccggccggcacagcctcgccggtcgactggcc
acgagcaatcgccacgaactcgccgaagcctggctgatggactggcgcggcgtctttggc
gagcgactgcacctggaactcacccgcaccggccgcgaaggcgaggacgcattcaacgcg
ttcgcgctgcatgcatcgagcaagcgttcgctgccggtcatcgccagcaacgacgtgcgc
ttcctcgatgccgaagggttcgacgcgcacgaagcgcgcgtgtgcatcgcctcgggccgc
gtgctcgacgatcccaagcggccgaaggactacagccccgagcagttcctgaagtcctcg
cacgagatgcaggcgctgttcgccgacgtgcccgacgcgatcgacaacgcgttcgcgctc
gccacgcgctgcaacgtcgagatgaagctcggcgaatacgcgctgccggccttcccggtg
cccagcgagcacacgatcgagagctggctgcgcggcaccgcgcgcgagggcctggacaag
cgcctgcagaagaatccgctcgccccgggcaggacgcgcgaggattacgacgcgcgcctg
gacatcgagctggacgtcatcatcaagatggggttccccggttacttccttatcgtggcg
gacttcatcaactgggcgaaggaccacgacatcccggtcggtccgggccgcggttcgggt
gcgggctcgctggtcgcgtgggcgctgggcatcaccgacctggacccgctgccgtacgac
ctgctgttcgagcggttcctcaaccccgaacgcgtgtcgatgcccgacttcgacatcgac
ttctgcatggaccgtcgcgacgaggtcatcgactacgtcgcgcgcaagtacgggcgcgat
cgcgtctcgcagatcatcacctacggcaccatggccgcgaaggccgtggtgcgcgacacc
ggccgcgtgctcggccatccgtacggcttcgtcgacggcatcgcgaaactcatcccgaac
acgctgggcatttcgctcgacgatgcgatgggcgagtcggaggcgtcgaagcaggatccg
atgctcgcctcgggcgatctcatccagcgttaccacgccgaagaagacgtgcgcgacctg
ctggacctcgcgcgcagcctggaagacctcacgcgaaacgccggcaagcacgccggcggc
gtggtgatcgcgccgagcccgctgtccgatttctgcccgctgttcgccgaacacgacggc
gaaggccgcggccgcaacccggtgacgcagttcgacaaggacgacgtcgaagcagtcggc
ctggtgaagttcgacttcctcggcctgcgcacgctgacgatcatcgactgggcggtgaag
gcgatcaacaagcgcctggccgacgccgccgcgaagggcatcgacgccggcccggcgatg
aaccacacgttcaaggacacggcgacgccgcagttcgacatcaccgcgctgccgctcgac
gacaaactcagttacgagctgttcgcgcgcggcgacacggtcgcggtgttccagttcgaa
tcgcgcggcatgcgcgaactgctcaagcgcgccaggcccgacacgttcgaagacatcatc
gcgctcgccgcgttgttccggcccggcccgctgggttcggggatggatcgcgaatgggtc
gatcgcaagcacggaaacaccgaggtcacctacccgcacgaatcgctggagccggtgctg
tcgccgacctacggcgtcatcgtgtaccaggaacaggtgatgcagatcgcgcaggtgctg
gcgggctacacgctcggcggcgccgacatgctccgtcgcgcgatgggcaagaagaagccc
gaggaaatggcgaaggagcgcgccaagttcgaagccggctgcaaggaacgcggcatcgat
ccgaagacctcctcgccgatcttcgacctgatggagaagttcgccgagtacggcttcaac
aagtcgcactcggcggcgtacgcgctggtcgcctaccagaccgcgtggctgaaggtgcac
tacccggccgagttcatggccgccgtgctgtcgtccgacatggacaacaccgagaaggtc
accagcttcctcgacgaatgccgcgtgatgggtctcaacgtgctgccgcccgacgtggac
gcgtcggcgtacatgttcgaggcgaaggacgcgaacacgatccgctacggcctgggcgcg
gtgaagggcgtcggccgcggcgcgtgcgaggcgatcgtcgaggcgcgtcgcgcgggcgag
ttcgcggatctgctggatttctgcaagcgcgtggacagcggcaagctcaatcgtcgcgcg
ctcgaagcgctgacgcaggcgggcgcgctcgacaagctcggcaagaatcgcgcgagcctc
atgctgcagctaccggaagtgctgaaggccaccgaccagctggcgaaggaacgcgaagca
ggacaggtgtcgttgtttggcggcttcgagaccgcggcgccggcgttgcacctggacctg
cccgaaaccgacgagtggccgctcacgcagatcctgcatggcgagcgcgagacgctcggc
cattacctcagcggccatccgttcgatccgtatcgcgacgaggtacgcgggctgatcggc
aacgacctcagtggcctcgaaaagatctgggaaaaccgccccgaacaacgcggcggctgg
cgccaggaagtcgagaccatcgtcgccggcctcgtcgtcgggctgcgcaagaagggcgac
agccagatgttcgtgcagatcgaggacggtcgcggccgcctggaatgcgcgttcttcaac
gaaagctacagcgagttcgcgcagttgctggtgcgcgaccgcctgctggtgatccagggc
ggcctgcgcgaggacagcttcagcggcggcttcgcgttgcgcgcgtcgcgctgctggagt
ttcgagcagatctgcgagaagcacgcgcaacgcctgatgttgcgactggacctgcgcgaa
cccggcacgatgcagcgcgtggacgcggtgctgtcctcgttccgcccgggctccacgccg
atccgcatggacctgctggtgcgtcgtggcgccgccggttcgctggatctcaacggcacg
cagtccattcgcgccgatgcggatctcgcctcgcgcctgcgcgcgacgccgggcgtgcgt
gcggtgaagctggcgctgtccaagccctgggcgaattaa
DBGET
integrated database retrieval system
