Lysobacter auxotrophicus: LA521A_12290
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Entry
LA521A_12290 CDS
T09075
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA521A_12290 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laux03400
]
LA521A_12290 (uvrA)
DNA repair and recombination proteins [BR:
laux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA521A_12290 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA521A_12290 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_23
nSTAND1
AAA_16
RsgA_GTPase
AAA_21
AAA_25
nSTAND3
Viral_helicase1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BDU16028
UniProt:
A0ABM8DBS0
LinkDB
All DBs
Position
complement(1373496..1376489)
Genome browser
AA seq
997 aa
AA seq
DB search
MALDYIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
RCPDHGYPLEAQTVSQMVDQVVALGESDAGREQRYMLLAPVIRERKGEHAQVFEQLRAQG
FVRVRVDGVLHEIDAVPPLALRVKHTIEAVVDRFKPREDIKQRLAESFETALKLGDGMAQ
VMSLDDADATPLLFSSKYSCPVCEYSLPELEPRLFSFNSPVGACPTCDGLGVAQFFDPSR
VVVHPELSLSAGAVRGWDRRNAYYFQLIQSLARHYRFDVDAPWQSLPKKARDAVLFGSGD
ETISFTYLTEAGGRSQRKHRFEGIVPNLERRYRETESAAVREELAKYISERACTDCGGAR
LNRAARSVFVAERPLPDIVVMPVDEALAFFKALNLPGWRGEIAIKIVKEISDRLRFLVDV
GLDYLTLERKADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTR
LRDLGNTVIVVEHDEDAIRLADYVVDIGPGAGVHGGEVIAHGTLDDLLKSPRSLTGQYLS
GKRAIEVPNKRHKPDAKTTFHLRGATGNNLKNVDLAIPSGLFTAVTGVSGSGKSTLINDT
LFAITANELNGASHTPAPYREHENIELWDKVVDIDQSPIGRTPRSNPATYTGLFTPLREL
YAQVPEARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCGGKRYNRE
TLEILYKGYNINDVLEMTVEDALNLFENIPSISRKLETLMDVGLSYIKLGQSATTLSGGE
AQRVKLSKELSRRDTGRTLYILDEPTTGLHFHDIEHLLTVLHRLRDDGNTVVVIEHNLDV
IKTADWVIDLGPEGGHRGGTILACGTPEDIAALSNSHTGRFLAPLLGTKPEASVRKARPA
AAKADGKATTTSTASKPTASKKAAAKTTTTKKKKSAA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggattacatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgat
ctcgacctcccccgcgacaagctgatcgtgatcaccggcctgtccgggtcgggcaagtcg
tcgctcgcgttcgacacgatctacgccgaaggccagcgtcgctacgtcgaatcgctgtcg
gcctacgcgcggcagttcctctccgtgatggagaagcccgacgtcgaccacatcgaaggc
ttgtcgccggcgatttcgatcgagcagaagtcgacctcgcacaacccgcggtcgacggtg
ggcacgatcaccgagatctacgactacctgcgtctgctctatgcgcgcgtgggcacgccg
cgctgcccggaccacggctatccgctggaagcgcagacggtcagccagatggtcgaccag
gtcgtcgcgctgggcgagtccgacgccggccgcgagcagcgctacatgctgctggcgccg
gtcatccgcgaacgcaagggcgagcacgcgcaggtgttcgaacagctgcgcgcgcagggt
ttcgtgcgcgtacgcgtggacggcgtgctgcacgagatcgacgccgtaccgccgctcgcg
ctgcgcgtgaagcacaccatcgaagcggtcgtggaccgtttcaagccgcgcgaggacatc
aagcagcgcctggccgaatcgttcgaaaccgcgctgaagctcggcgacggcatggcgcag
gtgatgtcgctcgacgacgccgacgcgacgccgctgctgttctcgtccaagtacagctgc
ccggtgtgcgaatactcgctgcccgagctcgaaccgcgcctgttctcgttcaactcgccg
gtcggcgcatgtccgacctgcgatggcctgggcgtggcgcaattcttcgatccctcgcgc
gtggtcgtgcatccggagctgtcgctctcggccggtgcggtgcgcggctgggatcgccgc
aacgcgtattacttccagctgatccagtcgctggcgcggcattacaggttcgacgtcgat
gcgccgtggcagtcgctgccgaagaaggcgcgcgacgcggtgctgttcggcagcggcgat
gaaaccatcagcttcacctacctcaccgaagccggcgggcgcagccagcgcaagcaccgt
ttcgaaggcatcgtgccgaacctggaacggcgctaccgcgaaaccgaatcggccgcggtg
cgcgaggaactggccaagtacatcagcgagcgcgcgtgcaccgattgcggcggcgcgcgc
ctgaaccgcgccgcgcgcagcgtgttcgtcgccgagcgtccgcttccggacatcgtcgtt
atgccggtggacgaggcgctcgcgttcttcaaggcgctcaacctgcccggctggcgcggc
gagatcgcgatcaagatcgtcaaggaaatctccgaccgcctccgcttcctggtggacgtc
ggcctggattacctcacgctggagcgcaaggccgattcgctgtcgggcggtgaagcgcag
cgtatccgcctggcctcgcagatcggcgcgggcctggtcggcgtgatgtacgtgctcgac
gagccgtccatcggcctgcaccagcgcgacaacgaacgactgctcggcacgctcacgcga
ctgcgcgacctgggcaacaccgtcatcgtcgtcgaacacgacgaggatgcgatccgcctg
gccgattacgtcgtcgacatcggacccggtgccggcgtgcacggcggcgaagtcatcgcg
cacggcacgctggacgacctgctcaagtcgccgcgttcgctcaccggccagtacctgtcg
ggcaagcgcgccatcgaggtgccgaacaagcgccacaagcccgatgcgaagaccaccttc
cacctgcgcggcgccacgggcaacaacctgaagaacgtggatctcgcgattccgtcgggg
ctgttcaccgcagtcacgggggtgtccggttcgggcaagtcgacgctgatcaacgacacg
ctgttcgcgatcaccgccaacgaactcaacggcgcctcgcacacgccggcgccgtaccgc
gagcacgagaacatcgagctgtgggacaaggtcgtcgacatcgaccagtcgccgatcggc
cgcacgccgcgctcgaacccggcgacgtacacgggcctgttcacgccgttgcgcgagctg
tacgcgcaggtgcccgaagcgcgcgcacgcggttattcgccggggcgtttcagcttcaac
gtgcgcggcggccgctgcgaagcctgccagggcgacggcctgatcaaggtcgagatgcac
ttcctgcccgacgtgtacgtgccgtgcgatgtctgcggcggcaagcgctacaaccgcgaa
acgctggagatcctctacaagggttacaacatcaacgacgtgctggagatgaccgtcgag
gatgcgctgaacctgttcgaaaacatcccgtcgatctcgcgcaagctcgaaacgctgatg
gacgtggggctgagctacatcaagctgggccagagcgcgacgacgctgtccggcggcgag
gcgcagcgcgtcaagctgtcgaaggagctctcgcgccgcgacacgggccgcacgctgtac
atcctcgacgaaccgacgacaggcctgcacttccacgacatcgagcacctgctcaccgtg
ctgcatcgcctgcgcgacgacggcaacacggtggtggtgatcgagcacaacctggacgtc
atcaagaccgccgactgggtcatcgacctcggtccggaaggcggccatcgcggcggcacg
atcctcgcctgcggcacgccggaagacatcgccgcgctgtcgaattcgcacaccggccgc
ttcctggcgccgctgctcggcacgaagccggaagcgtccgtgcgcaaggcgcgtcccgcg
gcggcgaaggccgatggcaaggcgaccaccacttcgactgcttcgaagcccacggcttcg
aagaaggcggcagcgaagaccaccacaaccaagaagaagaaatccgccgcatga
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